RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 AK1P00568 194 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 PTGER4P35408 488 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 KHKP50053 298 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 MVDP53602 400 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 CLDN18P56856 261 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 STX1BP61266 288 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF117Q03924 483 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 GPR68Q15743 365 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF630Q2M218 657 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 TMEM44Q2T9K0 475 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 NDUFAF6Q330K2 333 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 RAET1LQ5VY80 246 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 SP5Q6BEB4 398 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 AAGABQ6PD74 315 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 SLC2A7Q6PXP3 512 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 CBLN3Q6UW01 205 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 ENPP6Q6UWR7 440 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 MSANTD1Q6ZTZ1 278 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 C16orf62Q7Z3J2 963 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 TRIML2Q8N7C3 387 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 TNIP2Q8NFZ5 429 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 PHOSPHO1Q8TCT1 267 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 ZFP90Q8TF47 636 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 CA5BP1Q8WTZ4 195 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 GTF2H4Q92759 462 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 DTNBP1Q96EV8 351 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 AURKBQ96GD4 344 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 UCK2Q9BZX2 261 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 EXD2Q9NVH0 621 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 VDAC3Q9Y277 283 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF337Q9Y3M9 751 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 ADGRG4Q8IZF6 3080 aa16.55■□□□□ 0.24
SNRPA1-203ENST00000540017 NBPF19A0A087WUL8 3843 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 H0YC42 278 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZCCHC18P0CG32 403 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF708P17019 499 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 MSX1P28360 303 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 CHRNB4P30926 498 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 GCKP35557 465 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 TPD52P55327 224 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 CLDN15P56746 228 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 GUCY1A3Q02108 690 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 RCAN2Q14206 197 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 MAPK14Q16539 360 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 PDZK1Q5T2W1 519 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 AP1ARQ63HQ0 302 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 NSUN5P2Q63ZY6 315 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 TYW3Q6IPR3 259 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 BLOC1S3Q6QNY0 202 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 LIX1LQ8IVB5 337 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF614Q8N883 585 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF527Q8NB42 609 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 NAXEQ8NCW5 288 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 LILRB4Q8NHJ6 448 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZPLD1Q8TCW7 415 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 STON2Q8WXE9 905 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF524Q96C55 264 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ROPN1LQ96C74 230 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZG16BQ96DA0 208 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ITCHQ96J02 903 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 TRIB1Q96RU8 372 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 NMUR2Q9GZQ4 415 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 PAIP1Q9H074 479 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF385DQ9H6B1 395 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 RMND5AQ9H871 391 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 CCDC167Q9P0B6 97 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 CARD8Q9Y2G2 431 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
SNRPA1-203ENST00000540017 NKX2-6A6NCS4 301 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 H0Y3Z8 333 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 HCRTR2O43614 444 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 UGT2B17O75795 530 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 AGR2O95994 175 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 HOXB9P17482 250 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 CAPN3P20807 821 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 CEACAM8P31997 349 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ATP4BP51164 291 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 SUCLG1P53597 346 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 MAPK11Q15759 364 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ZNF141Q15928 474 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 SYPL1Q16563 259 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 GLYR1Q49A26 553 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 AGKQ53H12 422 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 HSP90B2PQ58FF3 399 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ATAD3BQ5T9A4 648 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 RIPPLY2Q5TAB7 128 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 CGB2Q6NT52 195 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 FRRS1Q6ZNA5 592 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 MTERF4Q7Z6M4 381 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 HMGN2P46Q86SG4 172 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ADGRE4PQ86SQ3 457 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 MISPQ8IVT2 679 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ARFGAP2Q8N6H7 521 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ANKFN1Q8N957 763 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 B4GALNT2Q8NHY0 566 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 ASB5Q8WWX0 329 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 SAP130Q9H0E3 1048 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 MED4Q9NPJ6 270 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 MED17Q9NVC6 651 aa16.53■□□□□ 0.24
SNRPA1-203ENST00000540017 FGFR1OP2Q9NVK5 253 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms