RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
ATL3-203ENST00000538786 BCL10O95999 233 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 ADORA3P0DMS8 318 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 FBLP22087 321 aaKnown RBP13.69□□□□□ -0.22
ATL3-203ENST00000538786 TGFBR2P37173 567 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 GPR4P46093 362 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 SIGLEC14Q08ET2 396 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 CMIPQ8IY22 773 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 ZNF614Q8N883 585 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 BCORP1Q8N888 145 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 PIGKQ92643 395 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 EDAQ92838 391 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 FGF11Q92914 225 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 SENP5Q96HI0 755 aaPredicted RBP13.69□□□□□ -0.22
ATL3-203ENST00000538786 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 TMEM27Q9HBJ8 222 aa13.69□□□□□ -0.22
ATL3-203ENST00000538786 PNO1Q9NRX1 252 aaKnown RBP13.69□□□□□ -0.22
ATL3-203ENST00000538786 DNAJB12Q9NXW2 375 aaKnown RBP13.69□□□□□ -0.22
ATL3-203ENST00000538786 LY6G6EA0A0G2JKS1 128 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 PTHP01270 115 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CDK4P11802 303 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CD36P16671 472 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 NR4A1P22736 598 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 ATP12AP54707 1039 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 SLC37A1P57057 533 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CSTF1Q05048 431 aaKnown RBP13.68□□□□□ -0.22
ATL3-203ENST00000538786 ZNF91Q05481 1191 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 FGFBP1Q14512 234 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 SPCS2Q15005 226 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 SNAPC1Q16533 368 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TIGD6Q17RP2 521 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATL3-203ENST00000538786 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 SYT14P1Q58G82 188 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 GUSBP11Q6P575 273 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 WDR88Q6ZMY6 472 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 ZNF620Q6ZNG0 422 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TMEM151BQ8IW70 566 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CLDN22Q8N7P3 220 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TMEM239Q8WW34 195 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 LRR1Q96L50 414 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 DPYSL5Q9BPU6 564 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TBC1D23Q9NUY8 699 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 ZNF223Q9UK11 482 aaPredicted RBP13.68□□□□□ -0.22
ATL3-203ENST00000538786 U3KQA8 63 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CPED1A4D0V7 1026 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 M0R082 166 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 YKT6O15498 198 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 ANKRD34CP0C6C1 535 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 DBTP11182 482 aaKnown RBP13.68□□□□□ -0.22
ATL3-203ENST00000538786 LIPAP38571 399 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 OCA2Q04671 838 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 NCF4Q15080 339 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 NNATQ16517 81 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 ZNF367Q7RTV3 350 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 MAML2Q8IZL2 1156 aaPredicted RBP13.68□□□□□ -0.22
ATL3-203ENST00000538786 FAM181AQ8N9Y4 354 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TMEM163Q8TC26 289 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TSLPQ969D9 159 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TSSK6Q9BXA6 273 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 TEX12Q9BXU0 123 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 CDH10Q9Y6N8 788 aa13.68□□□□□ -0.22
ATL3-203ENST00000538786 A0A0B4J2E0 115 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 A0A1B0GX12 115 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 CDC42EP2O14613 210 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 SIGLEC6O43699 453 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ADRA2AP08913 450 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ACAA2P42765 397 aaKnown RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 RHAGQ02094 409 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 PRKCDQ05655 676 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ELAVL1Q15717 326 aaKnown RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 CLEC12AQ5QGZ9 265 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ARHGAP40Q5TG30 622 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 PEAR1Q5VY43 1037 aaPredicted RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 ZNF574Q6ZN55 896 aaPredicted RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 ZNF550Q7Z398 422 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 TMPRSS9Q7Z410 1059 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 BCDIN3DQ7Z5W3 292 aaKnown RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 LSMEM1Q8N8F7 131 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ZSCAN1Q8NBB4 408 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 TMEM80Q96HE8 168 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 HS6ST2Q96MM7 605 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ZNF582Q96NG8 517 aaPredicted RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 SLC46A1Q96NT5 459 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 TRIM2Q9C040 744 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 FSCN3Q9NQT6 498 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 ATXN7L1Q9ULK2 861 aaPredicted RBP13.67□□□□□ -0.22
ATL3-203ENST00000538786 SRPK3Q9UPE1 567 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 CFL2Q9Y281 166 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 CLCA3PQ9Y6N3 262 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 PCDH15Q96QU1 1955 aa13.67□□□□□ -0.22
ATL3-203ENST00000538786 TCRBV16S1A1N1A0A5B0 115 aa13.66□□□□□ -0.22
ATL3-203ENST00000538786 UNC119BA6NIH7 251 aa13.66□□□□□ -0.22
ATL3-203ENST00000538786 POLR1CO15160 346 aaPredicted RBP13.66□□□□□ -0.22
ATL3-203ENST00000538786 CHP2O43745 196 aa13.66□□□□□ -0.22
ATL3-203ENST00000538786 IGKV3-11P04433 115 aa13.66□□□□□ -0.22
ATL3-203ENST00000538786 RORAP35398 523 aa13.66□□□□□ -0.22
ATL3-203ENST00000538786 PPICP45877 212 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms