RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 A0A1W2PQD3 144 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 CLEC18AA5D8T8 446 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 ANKUB1A6NFN9 424 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 STX11O75558 287 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 IL11P20809 199 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 SLC6A2P23975 617 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 ADSLP30566 484 aaPredicted RBP11.88□□□□□ -0.51
CHFR-216ENST00000538235 PGM1P36871 562 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 SKP2Q13309 424 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 FGFBP1Q14512 234 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 TMEM44Q2T9K0 475 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 GPAT3Q53EU6 434 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 COQ5Q5HYK3 327 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 PLXDC2Q6UX71 529 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 CLEC18BQ6UXF7 455 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 GFRALQ6UXV0 394 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 ZNF836Q6ZNA1 936 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 NET1Q7Z628 596 aaPredicted RBP11.88□□□□□ -0.51
CHFR-216ENST00000538235 SLC22A16Q86VW1 577 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 VRK2Q86Y07 508 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 CLEC18CQ8NCF0 446 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 OR1J4Q8NGS1 313 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 CNOT9Q92600 299 aaKnown RBP11.88□□□□□ -0.51
CHFR-216ENST00000538235 TRNT1Q96Q11 434 aaKnown RBP11.88□□□□□ -0.51
CHFR-216ENST00000538235 G6PC3Q9BUM1 346 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
CHFR-216ENST00000538235 UBQLN4Q9NRR5 601 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 AGPAT4Q9NRZ5 378 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 PPP4R1LQ9P1A2 415 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 TINAGQ9UJW2 476 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 ICAM5Q9UMF0 924 aa11.88□□□□□ -0.51
CHFR-216ENST00000538235 SERINC4A6NH21 518 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 AGAP5A6NIR3 686 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 DUXAA6NLW8 204 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 CCT8L1PA6NM43 557 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 BBIP1A8MTZ0 92 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 J3QKU1 62 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 NME4O00746 187 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 EFNA2O43921 213 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 CCDC22O60826 627 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 SEMA7AO75326 666 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 AK1P00568 194 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 GUSBP08236 651 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 PSMA4P25789 261 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 LCN1P31025 176 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 PSMD4P55036 377 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 GFRA1P56159 465 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 CLDN15P56746 228 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 RPP38P78345 283 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 CRYZQ08257 329 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 FADDQ13158 208 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 CYLC2Q14093 348 aaPredicted RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 GCNT6Q5T4J0 391 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 C1QL3Q5VWW1 255 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 FAM91A1Q658Y4 838 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 C3P1Q6ZMU1 363 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 LRRC74BQ6ZQY2 392 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 PACS2Q86VP3 889 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 MARVELD2Q8N4S9 558 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 ANKS4BQ8N8V4 417 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 RP9Q8TA86 221 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 C1GALT1C1Q96EU7 318 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 TREX2Q9BQ50 279 aaPredicted RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 PIF1Q9H611 641 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 EXD2Q9NVH0 621 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 P2RX2Q9UBL9 471 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 MRTO4Q9UKD2 239 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 OSGIN2Q9Y236 505 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 CARD8Q9Y2G2 431 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 RPH3AQ9Y2J0 694 aaPredicted RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
CHFR-216ENST00000538235 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
CHFR-216ENST00000538235 CACNA1CQ13936 2221 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 TMEM229AB2RXF0 380 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 H0YC42 278 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 ACOT7O00154 380 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 AP3D1O14617 1153 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 AIM2O14862 343 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 NDUFB5O43674 189 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 TPST1O60507 370 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 T-ENOLP0DO92 83 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 NR2F1P10589 423 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 ATP6V1C1P21283 382 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 ELAVL4P26378 380 aaKnown RBP11.86□□□□□ -0.51
CHFR-216ENST00000538235 SHC1P29353 583 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 SRD5A2P31213 254 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 STARP49675 285 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
CHFR-216ENST00000538235 PCBP3P57721 371 aaKnown RBP11.86□□□□□ -0.51
CHFR-216ENST00000538235 EEF1A1P68104 462 aaKnown RBP11.86□□□□□ -0.51
CHFR-216ENST00000538235 PLPPR5Q32ZL2 321 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 RTL6Q6ICC9 239 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 Q6ZPB1 254 aaPredicted RBP11.86□□□□□ -0.51
CHFR-216ENST00000538235 GHDCQ8N2G8 530 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 CLIP4Q8N3C7 705 aa11.86□□□□□ -0.51
CHFR-216ENST00000538235 OR10A6Q8NH74 314 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms