RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 PRICKLE4Q2TBC4 344 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 TRMT12Q53H54 448 aaKnown RBP8.14□□□□□ -1.11
CPSF7-217ENST00000537162 CT45A2Q5DJT8 189 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 ZNF311Q5JNZ3 666 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 MRM1Q6IN84 353 aaKnown RBP8.14□□□□□ -1.11
CPSF7-217ENST00000537162 LRRC8EQ6NSJ5 796 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 FIP1L1Q6UN15 594 aaKnown RBP8.14□□□□□ -1.11
CPSF7-217ENST00000537162 NPSR1Q6W5P4 371 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 ESPNLQ6ZVH7 1005 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 MARCH3Q86UD3 253 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 RHOT2Q8IXI1 618 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 ANKK1Q8NFD2 765 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 OR52R1Q8NGF1 315 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 LINC01006Q8NI28 216 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 UHMK1Q8TAS1 419 aaKnown RBP8.14□□□□□ -1.11
CPSF7-217ENST00000537162 MUS81Q96NY9 551 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 PTGES2Q9H7Z7 377 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 BCO1Q9HAY6 547 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 PRM3Q9NNZ6 103 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 IARS2Q9NSE4 1012 aaKnown RBP8.14□□□□□ -1.11
CPSF7-217ENST00000537162 MAT2BQ9NZL9 334 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 PHF11Q9UIL8 331 aa8.14□□□□□ -1.11
CPSF7-217ENST00000537162 IGHV3OR16-10A0A075B7F0 116 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 IGHV1-18A0A0C4DH31 117 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 PLPP1O14494 284 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 PPIHO43447 177 aaKnown RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 ERCC1P07992 297 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 ITGA5P08648 1049 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 MTHFD2P13995 350 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 ANPEPP15144 967 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 IL12BP29460 328 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 RAB10P61026 200 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 RAC1P63000 192 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 EFR3AQ14156 821 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 KCTD19Q17RG1 926 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 FBXO48Q5FWF7 155 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 ARMCX4Q5H9R4 360 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 RBM20Q5T481 1227 aaKnown RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 AVPI1Q5T686 147 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 C9orf135Q5VTT2 229 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 LRRC70Q7Z2Q7 622 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 R3HCC1LQ7Z5L2 792 aaKnown RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 SRFBP1Q8NEF9 429 aaKnown RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 BHLHE22Q8NFJ8 381 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 POC1BQ8TC44 478 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 SLC9A6Q92581 669 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 ITPKCQ96DU7 683 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 RNF145Q96MT1 663 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 MCMBPQ9BTE3 642 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 ZNF717Q9BY31 904 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 TRIM54Q9BYV2 358 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 IL22Q9GZX6 179 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 RAB6BQ9NRW1 208 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 TAS2R16Q9NYV7 291 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 NKX1-2Q9UD57 310 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-217ENST00000537162 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
CPSF7-217ENST00000537162 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 CCDC151A5D8V7 595 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 EFNA2O43921 213 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 KERAO60938 352 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 ULK1O75385 1050 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 PABPC4LP0CB38 370 aaKnown RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 CPMP14384 443 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 TCN1P20061 433 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 PIK3R1P27986 724 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 NTF4P34130 210 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 PTPN7P35236 360 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 FDFT1P37268 417 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 XKP51811 444 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 PNLIPRP2P54317 469 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 MANFP55145 182 aaKnown RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 COPS2P61201 443 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 LCN2P80188 198 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 DBPQ10586 325 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 LTB4RQ15722 352 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 TMEM35AQ53FP2 167 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 DMRTC1Q5HYR2 192 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 KHDRBS2Q5VWX1 349 aaKnown RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 ZNF771Q7L3S4 317 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 WDFY1Q8IWB7 410 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 GTPBP8Q8N3Z3 284 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 DEFB108BQ8NET1 73 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 SLC35B2Q8TB61 432 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 REXO5Q96IC2 774 aaKnown RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 KLHL15Q96M94 604 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 LRRC1Q9BTT6 524 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 PITHD1Q9GZP4 211 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-217ENST00000537162 SEC61A2Q9H9S3 476 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 DYNLRB1Q9NP97 96 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 SLC17A5Q9NRA2 495 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 FRAS1Q86XX4 4008 aa8.12□□□□□ -1.11
CPSF7-217ENST00000537162 A0A0A6YYD5 115 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 TCRBV7S2A1N4TA0A589 114 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 CLGNO14967 610 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 RGS14O43566 566 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 RP2O75695 350 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 GBAP04062 536 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 CRYBA1P05813 215 aa8.11□□□□□ -1.11
CPSF7-217ENST00000537162 FAM58BPP0C7Q3 252 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms