RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CDK10Q15131 360 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 P2RY14Q15391 338 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 OR1Q1Q15612 314 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 RPL13AP3Q6NVV1 102 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 ENPP7Q6UWV6 458 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 LNX2Q8N448 690 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 TMEM239Q8WW34 195 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 PMM1Q92871 262 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 SENP5Q96HI0 755 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 KCNJ15Q99712 375 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 TMEM43Q9BTV4 400 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 ISG20L2Q9H9L3 353 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 DUSP22Q9NRW4 184 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 NUFIP1Q9UHK0 495 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 DOCK8Q8NF50 2099 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 A0A087WV62 115 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CD8B2A6NJW9 211 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 C12orf71A8MTZ7 269 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 A8MV72 311 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 GTPBP1O00178 669 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 BHLHE40O14503 412 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 RNF13O43567 381 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CTSVO60911 334 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 NCR1O76036 304 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CD8BP10966 210 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 AK4P27144 223 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 NTSR1P30989 418 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 MTNR1BP49286 362 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 INSL4Q14641 139 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 MAPK14Q16539 360 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 EXOSC6Q5RKV6 272 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CCNJQ5T5M9 372 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 FHL5Q5TD97 284 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 NIPAL3Q6P499 406 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 ZCCHC12Q6PEW1 402 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 ABHD13Q7L211 337 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CDK20Q8IZL9 346 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 UBE2J2Q8N2K1 259 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CAMKVQ8NCB2 501 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 OR1E3Q8WZA6 343 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 KXD1Q9BQD3 176 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 DPH1Q9BZG8 443 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 TWSG1Q9GZX9 223 aa14.9□□□□□ -0.02
CHMP1A-202ENST00000535997 CDHR4A6H8M9 788 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 RFXAPO00287 272 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 PLOD3O60568 738 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 RGS9O75916 674 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 LAMP2P13473 410 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 PRG2P13727 222 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 CLDN2P57739 230 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 FXYD6P3P58550 94 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 PRPF38BQ5VTL8 546 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 SDE2Q6IQ49 451 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 TMPRSS11FQ6ZWK6 438 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 ASCC1Q8N9N2 400 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 CDRT4Q8N9R6 151 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 ZCCHC10Q8TBK6 192 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 FANK1Q8TC84 345 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 NACC2Q96BF6 587 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 AHCYL2Q96HN2 611 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 DMRTB1Q96MA1 342 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 STACQ99469 402 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 TIMP4Q99727 224 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 ALG8Q9BVK2 526 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 RNF32Q9H0A6 362 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 LYRM4Q9HD34 91 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 INPP5EQ9NRR6 644 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 DZANK1Q9NVP4 752 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 A0A0B4J293 547 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 CENPVL1A0A0U1RR11 272 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 FAM86C2PA6NEL3 165 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 P2RX6O15547 441 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 DNAJB6O75190 326 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 ATP1B1P05026 303 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 YES1P07947 543 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 CD53P19397 219 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 TBXA2RP21731 343 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 F8A1P23610 371 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 HTR2AP28223 471 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 TMEM196Q5HYL7 178 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 DCST2Q5T1A1 773 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 MRPL2Q5T653 305 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 WDR88Q6ZMY6 472 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 RD3Q7Z3Z2 195 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 NOXA1Q86UR1 476 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 ELSPBP1Q96BH3 223 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 RNF31Q96EP0 1072 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 UBL7Q96S82 380 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 GABRG3Q99928 467 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 GDF15Q99988 308 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 SLC6A17Q9H1V8 727 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 FBRSQ9HAH7 460 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 RANGRFQ9HD47 186 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 C20orf141Q9NUB4 165 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 CLDND1Q9NY35 253 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 PILRAQ9UKJ1 303 aa14.89□□□□□ -0.03
CHMP1A-202ENST00000535997 GRXCR1A8MXD5 290 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 CENPBD1B2RD01 187 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 SGK494L7N484 410 aa14.88□□□□□ -0.03
CHMP1A-202ENST00000535997 LYRM1O43325 122 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms