RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 RAD51Q06609 339 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CDC20Q12834 499 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ART3Q13508 389 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 DEFB133Q30KQ1 61 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM106AQ4KMX7 169 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 C14orf28Q4W4Y0 310 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 VWA2Q5GFL6 755 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM182AQ5T1J6 154 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 C1orf189Q5VU69 101 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ARHGAP17Q68EM7 881 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PM20D1Q6GTS8 502 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM166AQ6J272 317 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM53AQ6NSI3 398 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PWWP2BQ6NUJ5 590 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CD164L2Q6UWJ8 174 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 GBP6Q6ZN66 633 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 USP43Q70EL4 1123 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ACOT1Q86TX2 421 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 VASH2Q86V25 355 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM219AQ8IW50 185 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CCDC65Q8IXS2 484 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 STK40Q8N2I9 435 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CARNMT1Q8N4J0 409 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 TCEANCQ8N8B7 351 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 C4orf32Q8N8J7 132 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 OR10G7Q8NGN6 311 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 KIAA1524Q8TCG1 905 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 HTR3CQ8WXA8 447 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 SLCO2A1Q92959 643 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM131CQ96AQ9 280 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CCDC127Q96BQ5 260 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 SNRNP40Q96DI7 357 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ART5Q96L15 291 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 BMFQ96LC9 184 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 LURAP1Q96LR2 239 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 PCDHB18PQ96TA0 734 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 MRPL45Q9BRJ2 306 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 LLPHQ9BRT6 129 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FAM129AQ9BZQ8 928 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF350Q9GZX5 532 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CUEDC2Q9H467 287 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 SRD5A3Q9H8P0 318 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 CYP3A43Q9HB55 503 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 UBE2TQ9NPD8 197 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 MRPL40Q9NQ50 206 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 FBXO8Q9NRD0 319 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 SLC39A1Q9NY26 324 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 APOBEC3BQ9UH17 382 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 KIAA1257Q9ULG3 409 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 TP53TG5Q9Y2B4 290 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 WIPI2Q9Y4P8 454 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 SLCO1B1Q9Y6L6 691 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 TNRC6AQ8NDV7 1962 aaKnown RBP2.83□□□□□ -1.96
SNHG1-202ENST00000535689 NF1P21359 2839 aa2.83□□□□□ -1.96
SNHG1-202ENST00000535689 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 PIKFYVEQ9Y2I7 2098 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 DCHS2Q6V1P9 2916 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CXorf51AA0A1B0GTR3 108 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 A0A1W2PNU3 283 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 KPNA3O00505 521 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 GRID2O43424 1007 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 SELENOFO60613 162 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 RTN2O75298 545 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 NEBLO76041 1014 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 TM7SF2O76062 418 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CLDN1O95832 211 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 DLATP10515 647 aaKnown RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 F3P13726 295 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CD99P14209 185 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 COX6B1P14854 86 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 ATP6V1B1P15313 513 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 TCF4P15884 667 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 PRKACGP22612 351 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 PKLRP30613 574 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 GPR183P32249 361 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CHRNA3P32297 505 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 DRD3P35462 400 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 SLC6A12P48065 614 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CRIP2P52943 208 aaPredicted RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 LIMK2P53671 638 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 B3GALT5-AS1P59052 145 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 ABCE1P61221 599 aaKnown RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 YWHAEP62258 255 aaKnown RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 RPS15P62841 145 aaKnown RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CNTN1Q12860 1018 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 FZD2Q14332 565 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 SLMAPQ14BN4 828 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 FASTKD3Q14CZ7 662 aaKnown RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 RPS6KA1Q15418 735 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 MAPK11Q15759 364 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CHRNA6Q15825 494 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 ZNF699Q32M78 642 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 POM121L1PQ3SYA9 428 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 RABGAP1LQ5R372 815 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 SLC27A4Q6P1M0 643 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 SLC39A4Q6P5W5 647 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 LCLAT1Q6UWP7 414 aa2.82□□□□□ -1.96
SNHG1-202ENST00000535689 MEX3BQ6ZN04 569 aaKnown RBP2.82□□□□□ -1.96
SNHG1-202ENST00000535689 CCDC73Q6ZRK6 1079 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms