RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SH3BGRL2Q9UJC5 107 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 ZNF490Q9ULM2 529 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-205ENST00000535375 DUSP12Q9UNI6 340 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 L3MBTL1Q9Y468 752 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 PPIAL4AQ9Y536 164 aa3.31□□□□□ -1.88
PRKDC-205ENST00000535375 CUX2O14529 1486 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 A0A087WZY1 265 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 A0A0U1RQV5 110 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 TTC26A0AVF1 554 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 ANGPT2O15123 496 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 AK1P00568 194 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 STSP08842 583 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 RBMXP38159 391 aaKnown RBP3.3□□□□□ -1.88
PRKDC-205ENST00000535375 CAV2P51636 162 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 MRPS6P82932 125 aaKnown RBP3.3□□□□□ -1.88
PRKDC-205ENST00000535375 OTUD4Q01804 1114 aaKnown RBP3.3□□□□□ -1.88
PRKDC-205ENST00000535375 PLOD1Q02809 727 aaPredicted RBP3.3□□□□□ -1.88
PRKDC-205ENST00000535375 MECOMQ03112 1051 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 ZP4Q12836 540 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 ADPRMQ3LIE5 342 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 EOGTQ5NDL2 527 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 LDLRAP1Q5SW96 308 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 RIPPLY2Q5TAB7 128 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 BTNL3Q6UXE8 466 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 VPS36Q86VN1 386 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 PSMG2Q969U7 264 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 FGGYQ96C11 551 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 SLC25A36Q96CQ1 311 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 GPA33Q99795 319 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 COQ10BQ9H8M1 238 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 GDAP2Q9NXN4 497 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 MGAT4BQ9UQ53 548 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 SMC3Q9UQE7 1217 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 AP1M2Q9Y6Q5 423 aa3.3□□□□□ -1.88
PRKDC-205ENST00000535375 ABCC4O15439 1325 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 FAM230AA0A1W2PPH8 454 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 FBLL1A6NHQ2 334 aaKnown RBP3.29□□□□□ -1.88
PRKDC-205ENST00000535375 IMPA2O14732 288 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 TM9SF1O15321 606 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 NOL3O60936 208 aaKnown RBP3.29□□□□□ -1.88
PRKDC-205ENST00000535375 PEX11AO75192 247 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 GPX5O75715 221 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 CABYRO75952 493 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 SEMG1P04279 462 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 KRT8P05787 483 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 CD55P08174 381 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 NCF1P14598 390 aaPredicted RBP3.29□□□□□ -1.88
PRKDC-205ENST00000535375 HOXD10P28358 340 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 HSF2Q03933 536 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
PRKDC-205ENST00000535375 CCDC36Q8IYA8 594 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 ARFGAP2Q8N6H7 521 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 ZNF540Q8NDQ6 660 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 DTNBP1Q96EV8 351 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 TMEM80Q96HE8 168 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 ELMO2Q96JJ3 720 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 FICDQ9BVA6 458 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 MRPL13Q9BYD1 178 aaKnown RBP3.29□□□□□ -1.88
PRKDC-205ENST00000535375 DPH5Q9H2P9 285 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 ACTR8Q9H981 624 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 VAT1LQ9HCJ6 419 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 P2RX2Q9UBL9 471 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 TMCC3Q9ULS5 477 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 FOXJ3Q9UPW0 622 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 NEU3Q9UQ49 428 aa3.29□□□□□ -1.88
PRKDC-205ENST00000535375 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.29□□□□□ -1.88
PRKDC-205ENST00000535375 COL4A4P53420 1690 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-205ENST00000535375 A0A1B0GUL7 405 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 H3BTX0 84 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 ABCD4O14678 606 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 CPLX1O14810 134 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 VPS26AO75436 327 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 TOM1L1O75674 476 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 BBOX1O75936 387 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 JCHAINP01591 159 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 VDAC1P21796 283 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 KIF5BP33176 963 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 ADRA1AP35348 466 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 HSP90AA5PQ58FG0 334 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 SLC39A4Q6P5W5 647 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 AFTPHQ6ULP2 937 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 ZNF562Q6V9R5 426 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 PPP1R27Q86WC6 154 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 BPIFB2Q8N4F0 458 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 ALLCQ8N6M5 410 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 NFAM1Q8NET5 270 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-205ENST00000535375 SELENOMQ8WWX9 145 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 FCGR1BQ92637 280 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 RWDD1Q9H446 243 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-205ENST00000535375 GLIPR2Q9H4G4 154 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 MARCH5Q9NX47 278 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 MEGF6O75095 1541 aa3.28□□□□□ -1.88
PRKDC-205ENST00000535375 PARD3Q8TEW0 1356 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 LGALS8O00214 317 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 CASKO14936 926 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 ALOX15BO15296 676 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 MAGEB4O15481 346 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-205ENST00000535375 SCGB2A1O75556 95 aa3.27□□□□□ -1.89
PRKDC-205ENST00000535375 SCRG1O75711 98 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms