RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PPP1R36Q96LQ0 422 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 NPAS1Q99742 590 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 GPATCH1Q9BRR8 931 aaKnown RBP12.66□□□□□ -0.38
SF3B2-215ENST00000534307 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 CENPHQ9H3R5 247 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 PIGMQ9H3S5 423 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 SERHL2Q9H4I8 314 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 HHATLQ9HCP6 504 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 AP4B1Q9Y6B7 739 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 KCNE3Q9Y6H6 103 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 MPDZO75970 2070 aa12.66□□□□□ -0.38
SF3B2-215ENST00000534307 A0A087WZY1 265 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 SLC22A20A6NK97 555 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 A6NNC1 897 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 SHISA8B8ZZ34 492 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 H3BML4 177 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 RNASET2O00584 256 aaKnown RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 GMFGO60234 142 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 SCN2BO60939 215 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 ART1P52961 327 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 EEF1A1P68104 462 aaKnown RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 BST1Q10588 318 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 STX3Q13277 289 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 TP53BP2Q13625 1128 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 GUSBP1Q15486 140 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 PLPPR5Q32ZL2 321 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 KLHL26Q53HC5 615 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 EEF1A1P5Q5VTE0 462 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 OR2A2Q6IF42 318 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 KIF18BQ86Y91 864 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 MISPQ8IVT2 679 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 CLECL1Q8IZS7 167 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 KIRREL3Q8IZU9 778 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 GATSQ8NAP1 163 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 OR8J2Q8NGG1 315 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 OR5AK3PQ8NH89 298 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 NRGNQ92686 78 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 MOAP1Q96BY2 351 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 STARD4Q96DR4 205 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 MEAF6Q9HAF1 191 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 MED17Q9NVC6 651 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 GALNT8Q9NY28 637 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 PACSIN3Q9UKS6 424 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
SF3B2-215ENST00000534307 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 ZNF175Q9Y473 711 aa12.65□□□□□ -0.38
SF3B2-215ENST00000534307 TUBAL3A6NHL2 446 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 SCDO00767 359 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 MSTNO14793 375 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 SEC14L5O43304 696 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 SOX30O94993 753 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 KRT16P08779 473 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 EPXP11678 715 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 DNAJA1P31689 397 aaKnown RBP12.64□□□□□ -0.39
SF3B2-215ENST00000534307 KIR2DL2P43627 348 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-215ENST00000534307 PCYT1AP49585 367 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 EEFSECP57772 596 aaKnown RBP12.64□□□□□ -0.39
SF3B2-215ENST00000534307 PHC1P78364 1004 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 CTU2Q2VPK5 515 aaKnown RBP12.64□□□□□ -0.39
SF3B2-215ENST00000534307 PGS1Q32NB8 556 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 BEND6Q5SZJ8 279 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-215ENST00000534307 DCST2Q5T1A1 773 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 OR4F3Q6IEY1 312 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 OGFOD2Q6N063 350 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 LUZP2Q86TE4 346 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 FNDC9Q8TBE3 224 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 POC1BQ8TC44 478 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 ZBTB8AQ96BR9 441 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 TESCQ96BS2 214 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 PINK1Q9BXM7 581 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 PNPOQ9NVS9 261 aa12.64□□□□□ -0.39
SF3B2-215ENST00000534307 TMEM120BA0PK00 339 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 OIP5O43482 229 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 SNNO75324 88 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-215ENST00000534307 AQP8O94778 261 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 CGAP01215 116 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 CD99P14209 185 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 SLC18A1P54219 525 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 RPS26P62854 115 aaKnown RBP12.63□□□□□ -0.39
SF3B2-215ENST00000534307 ZNF117Q03924 483 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 PON3Q15166 354 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 SPDYE7PQ495Y7 208 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 CHMP1BQ7LBR1 199 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 P4HA3Q7Z4N8 544 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 MTERF4Q7Z6M4 381 aaKnown RBP12.63□□□□□ -0.39
SF3B2-215ENST00000534307 OR5D16Q8NGK9 328 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 B4GALNT2Q8NHY0 566 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms