RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GNG11P61952 73 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 RAB1AP62820 205 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 PRAMEP78395 509 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TIAL1Q01085 375 aaKnown RBP eCLIP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ACVR1Q04771 509 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 BSPH1Q075Z2 132 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 LGALS3BPQ08380 585 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 FUT7Q11130 342 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 STX4Q12846 297 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 GPS1Q13098 491 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TFDP2Q14188 446 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 GALEQ14376 348 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 HABP2Q14520 560 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 HLXQ14774 488 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 SF3B4Q15427 424 aaKnown RBP eCLIP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CARTPTQ16568 116 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 PHKG1Q16816 387 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 PARP6Q2NL67 630 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF260Q3ZCT1 412 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF672Q499Z4 452 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 IQCCQ4KMZ1 466 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ODF2Q5BJF6 829 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 KHDC1LQ5JSQ8 128 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 NCMAPQ5T1S8 102 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TIGD3Q6B0B8 471 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 MFSD12Q6NUT3 480 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF549Q6P9A3 640 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 AGTRAPQ6RW13 159 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CLEC2AQ6UVW9 174 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 RINLQ6ZS11 566 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 BBS12Q6ZW61 710 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 H2AFVQ71UI9 128 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 C17orf64Q86WR6 236 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CNGA4Q8IV77 575 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 LRRC8AQ8IWT6 810 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 KLHDC8BQ8IXV7 354 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 KLHDC8AQ8IYD2 350 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CPNE9Q8IYJ1 553 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 OTUD6BQ8N6M0 293 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 WDSUB1Q8N9V3 476 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 IL17RDQ8NFM7 739 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ABHD11Q8NFV4 315 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 OR4K1Q8NGD4 311 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 OR14L1PQ8NHC6 308 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 FNDC9Q8TBE3 224 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 SPPL2AQ8TCT8 520 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 LPGAT1Q92604 370 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 KAT2AQ92830 837 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 DAZLQ92904 295 aaKnown RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 NEIL2Q969S2 332 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 NTNG2Q96CW9 530 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 REPS1Q96D71 796 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ZMYND19Q96E35 227 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 C11orf24Q96F05 449 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 SLC35A4Q96G79 324 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 SNF8Q96H20 258 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 FAR2Q96K12 515 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ZNF597Q96LX8 424 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 DGAT2Q96PD7 388 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 BTBD9Q96Q07 612 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 PANX3Q96QZ0 392 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 F2RL3Q96RI0 385 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 NODALQ96S42 347 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 VRK1Q99986 396 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 MAPKAP1Q9BPZ7 522 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 C19orf43Q9BQ61 176 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 DESI2Q9BSY9 194 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 SORBS1Q9BX66 1292 aaKnown RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TSSK1BQ9BXA7 367 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CACNG6Q9BXT2 260 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TRIM2Q9C040 744 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 LRRC40Q9H9A6 602 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ESM1Q9NQ30 184 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CCDC177Q9NQR7 707 aaPredicted RBP2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TAS2R10Q9NYW0 307 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 EHD3Q9NZN3 535 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 CNIH4Q9P003 139 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 UVRAGQ9P2Y5 699 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ANAPC5Q9UJX4 755 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 FBXL2Q9UKC9 423 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 IKZF3Q9UKT9 509 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 ZDHHC8Q9ULC8 765 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 PROCRQ9UNN8 238 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 RNF115Q9Y4L5 304 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.62□□□□□ -1.999e-7■■■■□ 20.8
CHMP4A-208ENST00000534106 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
CHMP4A-208ENST00000534106 TENM2Q9NT68 2774 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 NINQ8N4C6 2090 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 LOC100653049A0A140TA62 436 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 A0A1W2PR80 420 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 TRBC2A0A5B9 178 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 LRIT2A6NDA9 550 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 GLOD5A6NK44 160 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 FAM157AC9JC47 383 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 APOC4-APOC2K7ER74 178 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 EIF3FO00303 357 aaPredicted RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 CDC7O00311 574 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SAP18O00422 153 aaKnown RBP2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 PPP6CO00743 305 aa2.61□□□□□ -1.99
CHMP4A-208ENST00000534106 SEC14L5O43304 696 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms