RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	EMCN	Q9ULC0	261 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	FZR1	Q9UM11	496 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	RPH3AL	Q9UNE2	315 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	SLC6A5	Q9Y345	797 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	WDR45	Q9Y484	360 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CRB1	P82279	1406 aa		4.03	□□□□□ -1.76
ATM-223	ENST00000533979	CCDC7	Q96M83	1385 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	VIRMA	Q69YN4	1812 aa	Known RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	TTC21A	Q8NDW8	1320 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	NFAT5	O94916	1531 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	IGLV5-45	A0A087WSX0	123 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979		A0A1W2PPI3	338 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	PMS2P5	A8MQ11	134 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	GOLGA8S	H3BPF8	625 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	NDUFS8	O00217	210 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ABCD4	O14678	606 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	NBR2	O15453	112 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	B4GAT1	O43505	415 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	EDIL3	O43854	480 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	TIMM8A	O60220	97 aa	Predicted RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	PCDH7	O60245	1069 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ZNF254	O75437	659 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	KRT33A	O76009	404 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	TSPAN12	O95859	305 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	GSTT2	P0CG29	244 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	GSTT2B	P0CG30	244 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	TROVE2	P10155	538 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	FGF5	P12034	268 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	CA6	P23280	308 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	EPHA2	P29317	976 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	NMT1	P30419	496 aa	Known RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	BMI1	P35226	326 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	HSD17B2	P37059	387 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	SLC11A1	P49279	550 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	GTF2A1	P52655	376 aa	Predicted RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	RPS4X	P62701	263 aa	Known RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	SRY	Q05066	204 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	KIR2DS3	Q14952	304 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	C3AR1	Q16581	482 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	KRT71	Q3SY84	523 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	PIP5KL1	Q5T9C9	394 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	DMKN	Q6E0U4	476 aa	Predicted RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ZNF562	Q6V9R5	426 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979		Q6ZRG5	221 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	RFPL4B	Q6ZWI9	263 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ANO5	Q75V66	913 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	NLRP9	Q7RTR0	991 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	DNAJC22	Q8N4W6	341 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	CCDC185	Q8N715	623 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ZNF473	Q8WTR7	871 aa	Known RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	LRRC45	Q96CN5	670 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ZNF501	Q96CX3	271 aa	Predicted RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ST6GAL2	Q96JF0	529 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	C8orf76	Q96K31	380 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	LURAP1	Q96LR2	239 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	PANX1	Q96RD7	426 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	RIT2	Q99578	217 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	SIKE1	Q9BRV8	207 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	RBM4	Q9BWF3	364 aa	Known RBP	4.02	□□□□□ -1.77
ATM-223	ENST00000533979	GLT8D2	Q9H1C3	349 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	HAUS4	Q9H6D7	363 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	AUNIP	Q9H7T9	357 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	IL1RL2	Q9HB29	575 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	SCRT2	Q9NQ03	307 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	IL20	Q9NYY1	176 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	NLGN3	Q9NZ94	848 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	POLK	Q9UBT6	870 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ADAM28	Q9UKQ2	775 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	COMMD3-BMI1	R4GMX3	469 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	SMCHD1	A6NHR9	2005 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	CACNA1G	O43497	2377 aa		4.02	□□□□□ -1.77
ATM-223	ENST00000533979	ABCC6	O95255	1503 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	TTC26	A0AVF1	554 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ESYT2	A0FGR8	921 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	SHISA7	A6NL88	538 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979		H3BMH7	237 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	STX7	O15400	261 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	AKR7A2	O43488	359 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	TSPAN2	O60636	221 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	SCGN	O76038	276 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	CALCA	P01258	141 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	IGHV4-39	P01824	125 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	FCER2	P06734	321 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	SLC35G4	P0C7Q5	338 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	FOSL2	P15408	326 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	S100A5	P33763	92 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	NDST1	P52848	882 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	PLA2G16	P53816	162 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	CLDN8	P56748	225 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	RPS15	P62841	145 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	IRX1	P78414	480 aa	Predicted RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	MRPS6	P82932	125 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ENPEP	Q07075	957 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	DNAJC3	Q13217	504 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	ENPP2	Q13822	863 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	GANAB	Q14697	944 aa	Known RBP	4.01	□□□□□ -1.77
ATM-223	ENST00000533979	KLHL40	Q2TBA0	621 aa		4.01	□□□□□ -1.77
ATM-223	ENST00000533979	XKR6	Q5GH73	641 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms