RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 AK1P00568 194 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 KRTAP10-9P60411 292 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 FOXF2Q12947 444 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 CD226Q15762 336 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 KLHL26Q53HC5 615 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 OR2A2Q6IF42 318 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 C6orf120Q7Z4R8 191 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 UBQLNLQ8IYU4 475 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 METTL25Q8N6Q8 603 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 GATSQ8NAP1 163 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 CHDHQ8NE62 594 aaPredicted RBP29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 MIPOL1Q8TD10 442 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 PIGMQ9H3S5 423 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 MANSC1Q9H8J5 431 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 KCNE3Q9Y6H6 103 aa29.8■■■□□ 2.36
SSSCA1-205ENST00000527920 RNF103-CHMP3A0A140T963 221 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 SLC22A20A6NK97 555 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 EEF1E1-BLOC1S5C9J1V9 151 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 NPIPB9F8W1W9 429 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 H3BML4 177 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 KLF11O14901 512 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 EEF1E1O43324 174 aaKnown RBP29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 KIR2DL3P43628 341 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 PHC1P78364 1004 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 SORDQ00796 357 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 AGBL2Q5U5Z8 902 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 KIF18BQ86Y91 864 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 OR4A15Q8NGL6 344 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 OR5M1Q8NGP8 315 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 INTS12Q96CB8 462 aaKnown RBP29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 MED17Q9NVC6 651 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 VDAC3Q9Y277 283 aa29.79■■■□□ 2.36
SSSCA1-205ENST00000527920 TGM6O95932 706 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 ALDOCP09972 364 aaKnown RBP29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 ZNF41P51814 821 aaPredicted RBP29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 AGFG1P52594 562 aaKnown RBP29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 SUCLG1P53597 346 aaKnown RBP29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 ATP12AP54707 1039 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 CLDN20P56880 219 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 PLPPR5Q32ZL2 321 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 FLYWCH1Q4VC44 716 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 SPANXN4Q5MJ08 99 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 B4GALNT2Q8NHY0 566 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 SERHL2Q9H4I8 314 aa29.78■■■□□ 2.36
SSSCA1-205ENST00000527920 H3BNH8 94 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 MATN1P21941 496 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 UQCRC2P22695 453 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 SUMO3P55854 103 aaPredicted RBP29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 RPS3AP61247 264 aaKnown RBP29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 PLXDC2Q6UX71 529 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 P4HA3Q7Z4N8 544 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 WDR75Q8IWA0 830 aaKnown RBP29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 GCNT2Q8N0V5 402 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 OR5D16Q8NGK9 328 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 SLC35G5Q96KT7 338 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 SDF2Q99470 211 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 NMUR2Q9GZQ4 415 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 CCDC168Q8NDH2 2452 aa29.77■■■□□ 2.36
SSSCA1-205ENST00000527920 PCNX3Q9H6A9 2034 aa29.76■■■□□ 2.36
SSSCA1-205ENST00000527920 TNFSF12-TNFSF13A0A0A6YY99 330 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 SEC14L5O43304 696 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 GMFGO60234 142 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 TNFSF13O75888 250 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 PSMA4P25789 261 aaKnown RBP29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 EPHA3P29320 983 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 S100A3P33764 101 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 FAM174BQ3ZCQ3 159 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 GGNQ86UU5 652 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 PHOSPHO1Q8TCT1 267 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 FAM222BQ8WU58 562 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 SH3YL1Q96HL8 342 aaPredicted RBP29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 MAELQ96JY0 434 aaKnown RBP29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 CCDC115Q96NT0 180 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 MARCOQ9UEW3 520 aaPredicted RBP29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 BTNL2Q9UIR0 455 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 PACSIN3Q9UKS6 424 aa29.76■■■□□ 2.35
SSSCA1-205ENST00000527920 OTOGQ6ZRI0 2925 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 A0A1W2PNV4 684 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 H0YC42 278 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 AGR2O95994 175 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 GUSBP08236 651 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 TPD52P55327 224 aaPredicted RBP29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 RPS26P62854 115 aaKnown RBP29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 ZNF117Q03924 483 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 DDX59Q5T1V6 619 aaKnown RBP eCLIP29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 ANKRD46Q86W74 232 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 TEX37Q96LM6 180 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 PINK1Q9BXM7 581 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 WDR55Q9H6Y2 383 aaPredicted RBP29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 CRIM1Q9NZV1 1036 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 DTNAQ9Y4J8 743 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 GPR45Q9Y5Y3 372 aa29.75■■■□□ 2.35
SSSCA1-205ENST00000527920 SHISA8B8ZZ34 492 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 EIF1P41567 113 aaKnown RBP29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 LRRC74AQ0VAA2 488 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 AP1ARQ63HQ0 302 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 GLB1L3Q8NCI6 653 aaPredicted RBP29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 OIT3Q8WWZ8 545 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 FIG4Q92562 907 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 RNF122Q9H9V4 155 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms