RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 GKAP1Q5VSY0 366 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-212ENST00000527887 ANKRD26P1Q6NSI1 321 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 APOOLQ6UXV4 268 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 TGIF2LYQ8IUE0 185 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 WDR75Q8IWA0 830 aaKnown RBP12.79□□□□□ -0.36
CAPN1-212ENST00000527887 KIRREL3Q8IZU9 778 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 SLC16A11Q8NCK7 471 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 OR4C3Q8NH37 302 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 PSMA8Q8TAA3 256 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 OR5P2Q8WZ92 322 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 C7orf26Q96N11 449 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 STACQ99469 402 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 LIME1Q9H400 295 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 PLEKHF2Q9H8W4 249 aa12.79□□□□□ -0.36
CAPN1-212ENST00000527887 EIF3LQ9Y262 564 aaKnown RBP12.79□□□□□ -0.36
CAPN1-212ENST00000527887 C17orf51A8MQB3 221 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 H3BML4 177 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SCDO00767 359 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SCAMP2O15127 329 aaKnown RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 HRGP04196 525 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SERPINE1P05121 402 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 CD99P14209 185 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 TCEA1P23193 301 aaKnown RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 KIR2DL2P43627 348 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SUCLG1P53597 346 aaKnown RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 MAD2L1Q13257 205 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 KEAP1Q14145 624 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SGCBQ16585 318 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 XKR7Q5GH72 579 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 EXOSC6Q5RKV6 272 aaKnown RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 CPTPQ5TA50 214 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SZRD1Q7Z422 152 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 LRRC34Q8IZ02 419 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 GTPBP8Q8N3Z3 284 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 COX18Q8N8Q8 333 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 CNEP1R1Q8N9A8 125 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 MOAP1Q96BY2 351 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 FAM120BQ96EK7 910 aaKnown RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 BTBD2Q9BX70 525 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 PINK1Q9BXM7 581 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 HOXD1Q9GZZ0 328 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 PIGUQ9H490 435 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 ZCCHC3Q9NUD5 404 aaKnown RBP12.78□□□□□ -0.36
CAPN1-212ENST00000527887 THAP1Q9NVV9 213 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 PLEKHA6Q9Y2H5 1048 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 C2CD3Q4AC94 2353 aa12.78□□□□□ -0.36
CAPN1-212ENST00000527887 SEC14L5O43304 696 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 PEX11AO75192 247 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 SNNO75324 88 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 SMNDC1O75940 238 aaKnown RBP eCLIP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 ACP2P11117 423 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 PRPS1L1P21108 318 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 CD79BP40259 229 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 EIF1P41567 113 aaKnown RBP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 CLDN20P56880 219 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 RAC1P63000 192 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 POU6F2P78424 691 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 STX3Q13277 289 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 PON3Q15166 354 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 DUSP5Q16690 384 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 SMU1Q2TAY7 513 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 C6orf136Q5SQH8 315 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 PDSS1Q5T2R2 415 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 BHLHB9Q6PI77 547 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 PLXDC2Q6UX71 529 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 BTLAQ7Z6A9 289 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 OR56A1Q8NGH5 318 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 CLHC1Q8NHS4 586 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 FNDC9Q8TBE3 224 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 FIG4Q92562 907 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 COQ8BQ96D53 544 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 ZNF845Q96IR2 970 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 SIKE1Q9BRV8 207 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 MECRQ9BV79 373 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 NEUROD4Q9HD90 331 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 FANCFQ9NPI8 374 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 GLRX2Q9NS18 164 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 SIRT3Q9NTG7 399 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 TESMINQ9Y4I5 508 aa12.77□□□□□ -0.37
CAPN1-212ENST00000527887 NIPBLQ6KC79 2804 aaeCLIP12.77□□□□□ -0.37
CAPN1-212ENST00000527887 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 MED12Q93074 2177 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 TMEM233B4DJY2 109 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 H3BNH8 94 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ADAMDEC1O15204 470 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 SNX3O60493 162 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ATE1O95260 518 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 CGAP01215 116 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 HMGN2P05204 90 aaKnown RBP12.76□□□□□ -0.37
CAPN1-212ENST00000527887 FOSL1P15407 271 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 IL11P20809 199 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ATP6V1C1P21283 382 aa12.76□□□□□ -0.37
CAPN1-212ENST00000527887 ME2P23368 584 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms