RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ZNF41P51814 821 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 CARD18P57730 90 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 SLC18A2Q05940 514 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 IMPG1Q17R60 797 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 PLPPR5Q32ZL2 321 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 VPS26BQ4G0F5 336 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 GLE1Q53GS7 698 aaKnown RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 DNAJC14Q6Y2X3 702 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 TIFABQ6ZNK6 161 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 ZNF551Q7Z340 670 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 GABRG1Q8N1C3 465 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 ROBO4Q8WZ75 1007 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 HSD17B8Q92506 261 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-210ENST00000527027 RNF145Q96MT1 663 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 EQTNQ9NQ60 294 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 LIPT1Q9Y234 373 aa14.35□□□□□ -0.11
PTPRU-210ENST00000527027 A0A087WUV0 522 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-210ENST00000527027 CD5LO43866 347 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 ADH6P28332 368 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 ACVR1BP36896 505 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 CDKN1AP38936 164 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 FOXA1P55317 472 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 TAB1Q15750 504 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 TMEM201Q5SNT2 666 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 SFRP5Q5T4F7 317 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 NOXRED1Q6NXP6 359 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 FIGNL1Q6PIW4 674 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 IKBIPQ70UQ0 350 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 TRIM46Q7Z4K8 759 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 TRABD2AQ86V40 505 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 LILRA2Q8N149 483 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 CDRT4Q8N9R6 151 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 GATSQ8NAP1 163 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 CEP70Q8NHQ1 597 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 POC1BQ8TC44 478 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 FAM110BQ8TC76 370 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 REXO5Q96IC2 774 aaKnown RBP14.34□□□□□ -0.11
PTPRU-210ENST00000527027 KLHL15Q96M94 604 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 GSTO2Q9H4Y5 243 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 TMEM185BQ9H7F4 350 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 MID1IP1Q9NPA3 183 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 YAE1D1Q9NRH1 226 aa14.34□□□□□ -0.11
PTPRU-210ENST00000527027 POLR3HQ9Y535 204 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-210ENST00000527027 MAGED1Q9Y5V3 778 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-210ENST00000527027 A0A1W2PP18 115 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 UBFD1O14562 309 aaKnown RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 FESP07332 822 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 THBS1P07996 1170 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 IL32P24001 234 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 GPC1P35052 558 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 HSPB3Q12988 150 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 RNPS1Q15287 305 aaKnown RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 TSC22D1Q15714 1073 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF672Q499Z4 452 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 TFAP2EQ6VUC0 442 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 DNM1P46Q6ZS02 220 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 NUFIP2Q7Z417 695 aaKnown RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 MISPQ8IVT2 679 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 PHC2Q8IXK0 858 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 OR6Y1Q8NGX8 325 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 RNF128Q8TEB7 428 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 NEUROG1Q92886 237 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 ZBED6CLQ96FA7 236 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 SH3YL1Q96HL8 342 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 FMO2Q99518 471 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 USB1Q9BQ65 265 aaKnown RBP14.33□□□□□ -0.12
PTPRU-210ENST00000527027 TIGARQ9NQ88 270 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 UBQLN4Q9NRR5 601 aa14.33□□□□□ -0.12
PTPRU-210ENST00000527027 RSL1D1O76021 490 aaKnown RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 KCNK2O95069 426 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 NTN1O95631 604 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 IGHV4-39P01824 125 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 HPGDP15428 266 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 LCN1P31025 176 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 EIF1P41567 113 aaKnown RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 PRKAG1P54619 331 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 MANFP55145 182 aaKnown RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 FAPQ12884 760 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 P2RY6Q15077 328 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF239Q16600 458 aaKnown RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 PGGHGQ32M88 737 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 ZAR1Q86SH2 424 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 TUSC5Q8IXB3 177 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 ZNF619Q8N2I2 560 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 CCNYL1Q8N7R7 359 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 SLC16A11Q8NCK7 471 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 B4GALNT2Q8NHY0 566 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 ABHD3Q8WU67 409 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 IFT81Q8WYA0 676 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 TMEM158Q8WZ71 300 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 CPNE4Q96A23 557 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 EGLN2Q96KS0 407 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 KLHDC3Q9BQ90 382 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 IQCGQ9H095 443 aaKnown RBP14.32□□□□□ -0.12
PTPRU-210ENST00000527027 LRTM1Q9HBL6 345 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 GP6Q9HCN6 339 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 NTMQ9P121 344 aa14.32□□□□□ -0.12
PTPRU-210ENST00000527027 KLHL13Q9P2N7 655 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms