RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 HKDC1Q2TB90 917 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 GPAT3Q53EU6 434 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 IL23RQ5VWK5 629 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 RAB12Q6IQ22 244 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 CDC42EP5Q6NZY7 148 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 DLEU7Q6UYE1 221 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 TAF8Q7Z7C8 310 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 ASPGQ86U10 573 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 RANBP3LQ86VV4 465 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 CALHM3Q86XJ0 350 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SERPINA12Q8IW75 414 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 STHQ8IWL8 128 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MYOCDQ8IZQ8 938 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 TTC5Q8N0Z6 440 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SFRP1Q8N474 314 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MRPL43Q8N983 215 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 OR4A16Q8NH70 328 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SNX21Q969T3 373 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 MCHR2Q969V1 340 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 HAVCR1Q96D42 359 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 C14orf79Q96F83 325 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF560Q96MR9 790 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF641Q96N77 438 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 TSPAN18Q96SJ8 248 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SPIN2AQ99865 258 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SPIN2BQ9BPZ2 258 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 WRAP53Q9BUR4 548 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 FUNDC2Q9BWH2 189 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 RPAP3Q9H6T3 665 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SYTL2Q9HCH5 934 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 PIGVQ9NUD9 493 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 HPF1Q9NWY4 346 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 CYP39A1Q9NYL5 469 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 KCNN3Q9UGI6 736 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 ENTPD4Q9Y227 616 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 SLCO1B1Q9Y6L6 691 aa1.12□□□□□ -2.23
ECHDC1-219ENST00000526299 A0A0A6YYC8 382 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 CFAP73A6NFT4 308 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 TUBAL3A6NHL2 446 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 E9PLD3 99 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 H0YIG0 161 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 I3L1I5 382 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 PES1O00541 588 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 PRPSAP2O60256 369 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 NME2P1O60361 137 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 NOL3O60936 208 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 N4BP1O75113 896 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 BCAS2O75934 225 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SYNGR4O95473 234 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 MT-ATP6P00846 226 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC4A1P02730 911 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 CXCL10P02778 98 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ALPPP05187 535 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 PGK2P07205 417 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 CHRNGP07510 517 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ALPPL2P10696 532 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 GAP43P17677 238 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SDC1P18827 310 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 TNNI3P19429 210 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 FCARP24071 287 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 CCND2P30279 289 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ACADSBP45954 432 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SMSP52788 366 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 NAPAP54920 295 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 RAG2P55895 527 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 MYBPC1Q00872 1141 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 EXOSC7Q15024 291 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 PKN2Q16513 984 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SYPL1Q16563 259 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 LRRC36Q1X8D7 754 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 KRTAP13-2Q52LG2 175 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 PARP10Q53GL7 1025 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 METTL11BQ5VVY1 283 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF57Q68EA5 555 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 NEK5Q6P3R8 708 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ATRAIDQ6UW56 229 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ARSKQ6UWY0 536 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 GET4Q7L5D6 327 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 P4HA3Q7Z4N8 544 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 TSEN54Q7Z6J9 526 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 RABEPKQ7Z6M1 372 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC22A16Q86VW1 577 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ZSCAN30Q86W11 494 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 PYROXD2Q8N2H3 581 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF619Q8N2I2 560 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 OR8H1Q8NGG4 311 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 URGCPQ8TCY9 931 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 LHX4Q969G2 390 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 RAB39BQ96DA2 213 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 DTD2Q96FN9 168 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 RNF185Q96GF1 192 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM111AQ96PZ2 611 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 KRT23Q9C075 422 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 XPO4Q9C0E2 1151 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 RAB17Q9H0T7 212 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM124BQ9H5Z6 455 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM231Q9H6L2 316 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 NANSQ9NR45 359 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms