RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 GCKP35557 465 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 ADH7P40394 386 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 KHKP50053 298 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 LHX2P50458 406 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 ANXA11P50995 505 aaKnown RBP11.73□□□□□ -0.53
CTSB-209ENST00000525315 NUP107P57740 925 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 FUT5Q11128 374 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 ART3Q13508 389 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 SF3B4Q15427 424 aaKnown RBP eCLIP11.73□□□□□ -0.533e-7■■□□□ 12
CTSB-209ENST00000525315 CD226Q15762 336 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 BCL2A1Q16548 175 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 TMEM44Q2T9K0 475 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 AGKQ53H12 422 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 COX20Q5RI15 118 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 C1orf185Q5T7R7 199 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 CGB2Q6NT52 195 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 AAGABQ6PD74 315 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 B3GNT6Q6ZMB0 384 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 C16orf62Q7Z3J2 963 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 ZPLD1Q8TCW7 415 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 OIT3Q8WWZ8 545 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 RND1Q92730 232 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 ROPN1LQ96C74 230 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 SPDL1Q96EA4 605 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 TPT1P8Q9HAU6 139 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 FGFR1OP2Q9NVK5 253 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 ALKBH4Q9NXW9 302 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 TRIM33Q9UPN9 1127 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 LIPT1Q9Y234 373 aa11.73□□□□□ -0.53
CTSB-209ENST00000525315 RPH3AQ9Y2J0 694 aaPredicted RBP11.73□□□□□ -0.53
CTSB-209ENST00000525315 INTS1Q8N201 2190 aaKnown RBP11.72□□□□□ -0.53
CTSB-209ENST00000525315 A0A087WZY1 265 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 A0A096LPI6 279 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 A0A0G2JND7 137 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 A0A1W2PP18 115 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 A1L4Q6 167 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 H3BNH8 94 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 UGT2B17O75795 530 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 ANP32DO95626 131 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
CTSB-209ENST00000525315 TROVE2P10155 538 aaKnown RBP eCLIP11.72□□□□□ -0.53
CTSB-209ENST00000525315 STARP49675 285 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 CDSNQ15517 529 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 GPR68Q15743 365 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 GTDC1Q4AE62 458 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 LRIF1Q5T3J3 769 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 TYW3Q6IPR3 259 aaKnown RBP11.72□□□□□ -0.53
CTSB-209ENST00000525315 SLC2A7Q6PXP3 512 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 ENPP6Q6UWR7 440 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 SEM1Q6ZVN7 128 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 OLIG3Q7RTU3 272 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 GATSQ8NAP1 163 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 B4GALNT2Q8NHY0 566 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 PHOSPHO1Q8TCT1 267 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 TSPEARQ8WU66 669 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 PMM1Q92871 262 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 ZG16BQ96DA0 208 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 SFXN2Q96NB2 322 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 ZNF317Q96PQ6 595 aaPredicted RBP11.72□□□□□ -0.53
CTSB-209ENST00000525315 TRNT1Q96Q11 434 aaKnown RBP11.72□□□□□ -0.53
CTSB-209ENST00000525315 UCN2Q96RP3 112 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 PIGQQ9BRB3 760 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 TMEM120AQ9BXJ8 343 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 CALHM2Q9HA72 323 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 MKLN1Q9UL63 735 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 ICAM5Q9UMF0 924 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 CAMK2AQ9UQM7 478 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 ZNF337Q9Y3M9 751 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 KLF2Q9Y5W3 355 aaPredicted RBP11.72□□□□□ -0.53
CTSB-209ENST00000525315 GMEB1Q9Y692 573 aa11.72□□□□□ -0.53
CTSB-209ENST00000525315 OR2M5A3KFT3 312 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 SERINC4A6NH21 518 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 KIAA0513O60268 411 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 EIF4E2O60573 245 aaKnown RBP11.71□□□□□ -0.53
CTSB-209ENST00000525315 DNAJA2O60884 412 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 CLDN14O95500 239 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 PEPDP12955 493 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ZNF708P17019 499 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 CAPN3P20807 821 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 TIMP3P35625 211 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 P2RX1P51575 399 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ARFIP2P53365 341 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 CLDN18P56856 261 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ZNF117Q03924 483 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 MAPK11Q15759 364 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 MAPK14Q16539 360 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 SYPL1Q16563 259 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
CTSB-209ENST00000525315 ACSF3Q4G176 576 aaPredicted RBP11.71□□□□□ -0.53
CTSB-209ENST00000525315 PAGE3Q5JUK9 113 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 C6orf10Q5SRN2 563 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 PDZK1Q5T2W1 519 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 RIPPLY2Q5TAB7 128 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 NSUN5P2Q63ZY6 315 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 CBLN3Q6UW01 205 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ARSKQ6UWY0 536 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 FRRS1Q6ZNA5 592 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 LRRC74BQ6ZQY2 392 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ADGRE4PQ86SQ3 457 aa11.71□□□□□ -0.53
CTSB-209ENST00000525315 ANKFN1Q8N957 763 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms