RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LILRB1Q8NHL6 650 aaPredicted RBP21.36■■□□□ 1.01
USP47-205ENST00000525257 POC1BQ8TC44 478 aa21.36■■□□□ 1.01
USP47-205ENST00000525257 ROBO4Q8WZ75 1007 aa21.36■■□□□ 1.01
USP47-205ENST00000525257 HOXB13Q92826 284 aaPredicted RBP21.36■■□□□ 1.01
USP47-205ENST00000525257 OSTF1Q92882 214 aa21.36■■□□□ 1.01
USP47-205ENST00000525257 HHATLQ9HCP6 504 aa21.36■■□□□ 1.01
USP47-205ENST00000525257 NTN1O95631 604 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 NGFRP08138 427 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 PDSS1Q5T2R2 415 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 ZNF619Q8N2I2 560 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 NUP43Q8NFH3 380 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 ACTRT2Q8TDY3 377 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 KLHL15Q96M94 604 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 TNFRSF12AQ9NP84 129 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 RRAGDQ9NQL2 400 aaPredicted RBP21.35■■□□□ 1.01
USP47-205ENST00000525257 FBXO34Q9NWN3 711 aa21.35■■□□□ 1.01
USP47-205ENST00000525257 CR1P17927 2039 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 SEC22BO75396 215 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 KCNK2O95069 426 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 SOD3P08294 240 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 ABHD2P08910 425 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 PYGBP11216 843 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 SHC1P29353 583 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 SFTPDP35247 375 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 CARD18P57730 90 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 WHAMMP3Q1A5X7 153 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 ZNF385BQ569K4 471 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 GTF2IRD2BQ6EKJ0 949 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 ADAM5Q6NVV9 412 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 GTF2IRD2Q86UP8 949 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 LILRA2Q8N149 483 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 SLC16A11Q8NCK7 471 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 CEP70Q8NHQ1 597 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 ABHD3Q8WU67 409 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 NEUROG1Q92886 237 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 FBXW5Q969U6 566 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 GTPBP3Q969Y2 492 aaKnown RBP21.34■■□□□ 1.01
USP47-205ENST00000525257 OTUB1Q96FW1 271 aaPredicted RBP21.34■■□□□ 1.01
USP47-205ENST00000525257 TRMT61AQ96FX7 289 aaKnown RBP21.34■■□□□ 1.01
USP47-205ENST00000525257 EMCNQ9ULC0 261 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 CUBNO60494 3623 aa21.34■■□□□ 1.01
USP47-205ENST00000525257 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 G3V2L1 256 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 OVOL3O00110 214 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 GCM2O75603 506 aaPredicted RBP21.33■■□□□ 1.01
USP47-205ENST00000525257 GSTA1P08263 222 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 MYL2P10916 166 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 HPGDP15428 266 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 CDKN1AP38936 164 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 ZNF239Q16600 458 aaKnown RBP21.33■■□□□ 1.01
USP47-205ENST00000525257 DUSP5Q16690 384 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 TMEM201Q5SNT2 666 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 HEPHL1Q6MZM0 1159 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 TFAP2EQ6VUC0 442 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 FRMD7Q6ZUT3 714 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 NUFIP2Q7Z417 695 aaKnown RBP21.33■■□□□ 1.01
USP47-205ENST00000525257 TRABD2AQ86V40 505 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 GABRG1Q8N1C3 465 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 ZFP28Q8NHY6 868 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 FAM110BQ8TC76 370 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 ACMSDQ8TDX5 336 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 RNF128Q8TEB7 428 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 CCDC126Q96EE4 140 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 GIMAP5Q96F15 307 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 REXO5Q96IC2 774 aaKnown RBP21.33■■□□□ 1.01
USP47-205ENST00000525257 MS4A4EQ96PG1 132 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 REG4Q9BYZ8 158 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 CCL27Q9Y4X3 112 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 PTGDR2Q9Y5Y4 395 aa21.33■■□□□ 1.01
USP47-205ENST00000525257 SCDO00767 359 aa21.32■■□□□ 1
USP47-205ENST00000525257 AKAP10O43572 662 aa21.32■■□□□ 1
USP47-205ENST00000525257 CD3EP07766 207 aa21.32■■□□□ 1
USP47-205ENST00000525257 DANCRP0C864 163 aa21.32■■□□□ 1
USP47-205ENST00000525257 PABPC4LP0CB38 370 aaKnown RBP21.32■■□□□ 1
USP47-205ENST00000525257 IL32P24001 234 aa21.32■■□□□ 1
USP47-205ENST00000525257 IDUAP35475 653 aa21.32■■□□□ 1
USP47-205ENST00000525257 PRIM2P49643 509 aa21.32■■□□□ 1
USP47-205ENST00000525257 FOXF1Q12946 379 aa21.32■■□□□ 1
USP47-205ENST00000525257 KIAA0040Q15053 153 aa21.32■■□□□ 1
USP47-205ENST00000525257 TAB1Q15750 504 aa21.32■■□□□ 1
USP47-205ENST00000525257 CD226Q15762 336 aa21.32■■□□□ 1
USP47-205ENST00000525257 ETFDHQ16134 617 aa21.32■■□□□ 1
USP47-205ENST00000525257 NCMAPQ5T1S8 102 aa21.32■■□□□ 1
USP47-205ENST00000525257 CCNJQ5T5M9 372 aa21.32■■□□□ 1
USP47-205ENST00000525257 ZYG11AQ6WRX3 759 aa21.32■■□□□ 1
USP47-205ENST00000525257 ATG4DQ86TL0 474 aaPredicted RBP21.32■■□□□ 1
USP47-205ENST00000525257 OR6Y1Q8NGX8 325 aa21.32■■□□□ 1
USP47-205ENST00000525257 B4GALNT2Q8NHY0 566 aa21.32■■□□□ 1
USP47-205ENST00000525257 C16orf58Q96GQ5 468 aa21.32■■□□□ 1
USP47-205ENST00000525257 HDHD5Q9BXW7 423 aa21.32■■□□□ 1
USP47-205ENST00000525257 SRXN1Q9BYN0 137 aa21.32■■□□□ 1
USP47-205ENST00000525257 ESRP2Q9H6T0 727 aaKnown RBP21.32■■□□□ 1
USP47-205ENST00000525257 UBQLN4Q9NRR5 601 aa21.32■■□□□ 1
USP47-205ENST00000525257 MAGED1Q9Y5V3 778 aaPredicted RBP21.32■■□□□ 1
USP47-205ENST00000525257 ABCA1O95477 2261 aa21.32■■□□□ 1
USP47-205ENST00000525257 FREM1Q5H8C1 2179 aa21.31■■□□□ 1
USP47-205ENST00000525257 TP53P04637 393 aaPredicted RBP21.31■■□□□ 1
USP47-205ENST00000525257 LINGO3P0C6S8 592 aa21.31■■□□□ 1
USP47-205ENST00000525257 ACVR1BP36896 505 aa21.31■■□□□ 1
USP47-205ENST00000525257 MANFP55145 182 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms