RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 SCDO00767 359 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 SMNDC1O75940 238 aaKnown RBP eCLIP8.49□□□□□ -1.057e-6■□□□□ 8.6
SF3B2-204ENST00000525207 AQP8O94778 261 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 C6orf47O95873 294 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 RAF1P04049 648 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 SERPINE1P05121 402 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 KRT16P08779 473 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 HPGDP15428 266 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 PRPS1L1P21108 318 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 PSMA4P25789 261 aaKnown RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF41P51814 821 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 SIRPAP78324 504 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 MAD2L1Q13257 205 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 FGFBP1Q14512 234 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 PDCD2Q16342 344 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 DCST2Q5T1A1 773 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 CPTPQ5TA50 214 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 IL23RQ5VWK5 629 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 DMRTA1Q5VZB9 504 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 FBXW10Q5XX13 1052 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 BTLAQ7Z6A9 289 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 RIMKLAQ8IXN7 391 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 NATD1Q8N6N6 113 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 ACTRT2Q8TDY3 377 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 OR5P2Q8WZ92 322 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 CDS1Q92903 461 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 ZBTB8AQ96BR9 441 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 TUBGCP3Q96CW5 907 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 COQ8BQ96D53 544 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 MBD6Q96DN6 1003 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 CHMP6Q96FZ7 201 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 SH3YL1Q96HL8 342 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 RNF145Q96MT1 663 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 ZIM3Q96PE6 472 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 KLHDC3Q9BQ90 382 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 ACTRT3Q9BYD9 372 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 BHLHE41Q9C0J9 482 aaPredicted RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 PLEKHF2Q9H8W4 249 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 UBQLN4Q9NRR5 601 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 MED17Q9NVC6 651 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 NOP53Q9NZM5 478 aaKnown RBP8.49□□□□□ -1.05
SF3B2-204ENST00000525207 SNX8Q9Y5X2 465 aa8.49□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF469Q96JG9 3925 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 FLNAP21333 2647 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 NPIPA5A0A0B4J1W7 369 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 NPIPA7E9PJI5 369 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 EIF1AYO14602 144 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 TM9SF1O15321 606 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 RGS16O15492 202 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ITM2AO43736 263 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ATE1O95260 518 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 CGAP01215 116 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 DHRS4L1P0CG22 281 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 NPIPA8P0DM63 369 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 CD8BP10966 210 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 G6PDP11413 515 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ATP6V1C1P21283 382 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 DNASE1P24855 282 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ELK4P28324 431 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 SOAT1P35610 550 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 CD79BP40259 229 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 CCT3P49368 545 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 SUMO3P55854 103 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 HBA1P69905 142 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF117Q03924 483 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 FAM27E3Q08E93 113 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 FOXF1Q12946 379 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 POU4F3Q15319 338 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 CHI3L2Q15782 390 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 SMU1Q2TAY7 513 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 LSM12Q3MHD2 195 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 SPDYE7PQ495Y7 208 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF474Q6S9Z5 364 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 MTERF4Q7Z6M4 381 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 NUDCD3Q8IVD9 361 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF781Q8N8C0 355 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 CHDHQ8NE62 594 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 OR10D3Q8NH80 312 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 OR5AK3PQ8NH89 298 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 B4GALNT2Q8NHY0 566 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 PPP1R14CQ8TAE6 165 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 NUDT8Q8WV74 236 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 MOAP1Q96BY2 351 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 PGM2Q96G03 612 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 PRPF18Q99633 342 aaKnown RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 DUSP26Q9BV47 211 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 OPN3Q9H1Y3 402 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 STOML1Q9UBI4 398 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 EDARQ9UNE0 448 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 FAF1Q9UNN5 650 aaPredicted RBP8.48□□□□□ -1.05
SF3B2-204ENST00000525207 ACANP16112 2415 aa8.48□□□□□ -1.05
SF3B2-204ENST00000525207 NPIPB9F8W1W9 429 aa8.47□□□□□ -1.05
SF3B2-204ENST00000525207 ADAMDEC1O15204 470 aa8.47□□□□□ -1.05
SF3B2-204ENST00000525207 BIRC5O15392 142 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms