RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 NDUFS7O75251 213 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SNRPAP09012 282 aaKnown RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 PRPS2P11908 318 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 ATP5F1P24539 256 aaPredicted RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 PSMA4P25789 261 aaKnown RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SHC1P29353 583 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 PRKAA2P54646 552 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 FOXA1P55317 472 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 PKNOX1P55347 436 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 CARD18P57730 90 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 BSPH1Q075Z2 132 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SLC29A2Q14542 456 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 IMPG1Q17R60 797 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 PGGHGQ32M88 737 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 GLE1Q53GS7 698 aaKnown RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 TMEM201Q5SNT2 666 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 TFAP2EQ6VUC0 442 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 ZNF572Q7Z3I7 529 aaPredicted RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 NUFIP2Q7Z417 695 aaKnown RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SZRD1Q7Z422 152 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 ZAR1Q86SH2 424 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 GABRG1Q8N1C3 465 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 POC1BQ8TC44 478 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 TMEM158Q8WZ71 300 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 REXO5Q96IC2 774 aaKnown RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 KLHL15Q96M94 604 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 HS6ST2Q96MM7 605 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 MID1IP1Q9NPA3 183 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 NGBQ9NPG2 151 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 GDF2Q9UK05 429 aaPredicted RBP11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SNX8Q9Y5X2 465 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 FREM1Q5H8C1 2179 aa11.34□□□□□ -0.59
SF3B2-203ENST00000524627 SERTM1A2A2V5 107 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 A8MV72 311 aaPredicted RBP11.33□□□□□ -0.6
SF3B2-203ENST00000524627 NKX2-2O95096 273 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 ADAP00813 363 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 NGFRP08138 427 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 PABPC4LP0CB38 370 aaKnown RBP11.33□□□□□ -0.6
SF3B2-203ENST00000524627 HPGDP15428 266 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 ADH6P28332 368 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 GPC1P35052 558 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 PRKAG1P54619 331 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 ZNF239Q16600 458 aaKnown RBP11.33□□□□□ -0.6
SF3B2-203ENST00000524627 CHRFAM7AQ494W8 412 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 VPS26BQ4G0F5 336 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 ANKRD26P1Q6NSI1 321 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 SYT10Q6XYQ8 523 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 TRABD2AQ86V40 505 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 SLC22A9Q8IVM8 553 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 TUSC5Q8IXB3 177 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 LILRA2Q8N149 483 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 BANPQ8N9N5 519 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 ACTRT2Q8TDY3 377 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 RNF128Q8TEB7 428 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 HSD17B8Q92506 261 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 KISS1RQ969F8 398 aaPredicted RBP11.33□□□□□ -0.6
SF3B2-203ENST00000524627 L3HYPDHQ96EM0 354 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 SRXN1Q9BYN0 137 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 ALG2Q9H553 416 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 HHATLQ9HCP6 504 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 KLHL13Q9P2N7 655 aa11.33□□□□□ -0.6
SF3B2-203ENST00000524627 UBFD1O14562 309 aaKnown RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 PDPK1O15530 556 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 KCNK2O95069 426 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 THBS1P07996 1170 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 IFI6P09912 130 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 ACP2P11117 423 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 MAP3K8P41279 467 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 PRIM2P49643 509 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 FOXF1Q12946 379 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 RNPS1Q15287 305 aaKnown RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 CD226Q15762 336 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 NOXRED1Q6NXP6 359 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 DNM1P46Q6ZS02 220 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 IKBIPQ70UQ0 350 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 CCNYL1Q8N7R7 359 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 CDRT4Q8N9R6 151 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 NUP43Q8NFH3 380 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 B4GALNT2Q8NHY0 566 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 FAM76AQ8TAV0 307 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 PIWIL2Q8TC59 973 aaKnown RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 CPNE4Q96A23 557 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 CIDECQ96AQ7 238 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 OTUB1Q96FW1 271 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 EGLN2Q96KS0 407 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 FMO2Q99518 471 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 TRAF4Q9BUZ4 470 aaPredicted RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 POTEKPQ9BYX7 375 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 TRIM2Q9C040 744 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 GSTO2Q9H4Y5 243 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 LRTM1Q9HBL6 345 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 TIGARQ9NQ88 270 aa11.32□□□□□ -0.6
SF3B2-203ENST00000524627 WBP11Q9Y2W2 641 aaKnown RBP11.32□□□□□ -0.6
SF3B2-203ENST00000524627 ALPK2Q86TB3 2170 aa11.31□□□□□ -0.6
SF3B2-203ENST00000524627 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.31□□□□□ -0.6
SF3B2-203ENST00000524627 A0A087WUV0 522 aaPredicted RBP11.31□□□□□ -0.6
SF3B2-203ENST00000524627 EXOC1LA0A1B0GW35 172 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms