RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 GTF2IRD2Q86UP8 949 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 GATSQ8NAP1 163 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 KBTBD8Q8NFY9 601 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 ACTRT2Q8TDY3 377 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 RNF128Q8TEB7 428 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 ABHD3Q8WU67 409 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 TRIM2Q9C040 744 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 LRTM1Q9HBL6 345 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 NGBQ9NPG2 151 aa20.22■□□□□ 0.83
PVT1-218ENST00000523328 GDF2Q9UK05 429 aaPredicted RBP20.22■□□□□ 0.83
PVT1-218ENST00000523328 A8MV72 311 aaPredicted RBP20.21■□□□□ 0.83
PVT1-218ENST00000523328 POC1B-GALNT4F8VUJ3 575 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 NKX2-2O95096 273 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 CD8AP01732 235 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 SHC1P29353 583 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 PKNOX1P55347 436 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 LCP2Q13094 533 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 ZNF239Q16600 458 aaKnown RBP20.21■□□□□ 0.83
PVT1-218ENST00000523328 SPDYAQ5MJ70 313 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 PDSS1Q5T2R2 415 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 ZNF619Q8N2I2 560 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 CEP112Q8N8E3 955 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 PIWIL2Q8TC59 973 aaKnown RBP20.21■□□□□ 0.83
PVT1-218ENST00000523328 GPR151Q8TDV0 419 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 HSD17B8Q92506 261 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 KLHL15Q96M94 604 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 TRAF4Q9BUZ4 470 aaPredicted RBP20.21■□□□□ 0.83
PVT1-218ENST00000523328 HHATLQ9HCP6 504 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 EQTNQ9NQ60 294 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 STK38LQ9Y2H1 464 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 SNX8Q9Y5X2 465 aa20.21■□□□□ 0.83
PVT1-218ENST00000523328 PLCE1Q9P212 2302 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 DPRXA6NFQ7 191 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 ME2P23368 584 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 IL32P24001 234 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 ZNF41P51814 821 aaPredicted RBP20.2■□□□□ 0.82
PVT1-218ENST00000523328 FOXA1P55317 472 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 CARD18P57730 90 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 BSPH1Q075Z2 132 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 GLE1Q53GS7 698 aaKnown RBP20.2■□□□□ 0.82
PVT1-218ENST00000523328 TMEM201Q5SNT2 666 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 ZNF551Q7Z340 670 aaPredicted RBP20.2■□□□□ 0.82
PVT1-218ENST00000523328 ZAR1Q86SH2 424 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 TRABD2AQ86V40 505 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 TUSC5Q8IXB3 177 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 SRXN1Q9BYN0 137 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 KLHL13Q9P2N7 655 aa20.2■□□□□ 0.82
PVT1-218ENST00000523328 WBP11Q9Y2W2 641 aaKnown RBP20.2■□□□□ 0.82
PVT1-218ENST00000523328 POLR3HQ9Y535 204 aaPredicted RBP20.2■□□□□ 0.82
PVT1-218ENST00000523328 CCDC151A5D8V7 595 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 PHF1O43189 567 aaPredicted RBP20.19■□□□□ 0.82
PVT1-218ENST00000523328 GPRIN2O60269 458 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 PABPC4LP0CB38 370 aaKnown RBP20.19■□□□□ 0.82
PVT1-218ENST00000523328 PRPS2P11908 318 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 ATP5F1P24539 256 aaPredicted RBP20.19■□□□□ 0.82
PVT1-218ENST00000523328 PRKAA2P54646 552 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 DTX2Q86UW9 622 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 LILRA2Q8N149 483 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 FAM110BQ8TC76 370 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 L3HYPDHQ96EM0 354 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 SH3YL1Q96HL8 342 aaPredicted RBP20.19■□□□□ 0.82
PVT1-218ENST00000523328 GRIP2Q9C0E4 1043 aa20.19■□□□□ 0.82
PVT1-218ENST00000523328 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 A0A096LNT2 108 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 ADAP00813 363 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 SNRPAP09012 282 aaKnown RBP20.18■□□□□ 0.82
PVT1-218ENST00000523328 LINGO3P0C6S8 592 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 SFTPDP35247 375 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 HSPB3Q12988 150 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 RNPS1Q15287 305 aaKnown RBP20.18■□□□□ 0.82
PVT1-218ENST00000523328 C8orf74Q6P047 294 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 IKBIPQ70UQ0 350 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 MMGT1Q8N4V1 131 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 BANPQ8N9N5 519 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 FAM76AQ8TAV0 307 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 KISS1RQ969F8 398 aaPredicted RBP20.18■□□□□ 0.82
PVT1-218ENST00000523328 CPNE4Q96A23 557 aaPredicted RBP20.18■□□□□ 0.82
PVT1-218ENST00000523328 GIMAP5Q96F15 307 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 HS6ST2Q96MM7 605 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 POTEKPQ9BYX7 375 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 GSTO2Q9H4Y5 243 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 GRPEL1Q9HAV7 217 aa20.18■□□□□ 0.82
PVT1-218ENST00000523328 BARX1Q9HBU1 254 aaPredicted RBP20.18■□□□□ 0.82
PVT1-218ENST00000523328 UBFD1O14562 309 aaKnown RBP20.17■□□□□ 0.82
PVT1-218ENST00000523328 EFNA2O43921 213 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 KCNK2O95069 426 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 F12P00748 615 aaPredicted RBP20.17■□□□□ 0.82
PVT1-218ENST00000523328 FAM157CP0CG43 387 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 ACP2P11117 423 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 MANFP55145 182 aaKnown RBP20.17■□□□□ 0.82
PVT1-218ENST00000523328 ITGADQ13349 1161 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 P2RY6Q15077 328 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 CD226Q15762 336 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 VPS26BQ4G0F5 336 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 C6orf52Q5T4I8 152 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 SLC22A9Q8IVM8 553 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 CDRT4Q8N9R6 151 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 SLC16A11Q8NCK7 471 aa20.17■□□□□ 0.82
PVT1-218ENST00000523328 REXO5Q96IC2 774 aaKnown RBP20.17■□□□□ 0.82
PVT1-218ENST00000523328 EGLN2Q96KS0 407 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms