RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PRKD3O94806 890 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 AHSGP02765 367 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 INHBAP08476 426 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CLEC2LP0C7M8 214 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 DHRS4L1P0CG22 281 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 ENO3P13929 434 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TNNI3P19429 210 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 SERPINB3P29508 390 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CRHR1P34998 444 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 SPRP35270 261 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 GP5P40197 560 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 PTGDSP41222 190 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CASP3P42574 277 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CLDN15P56746 228 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CLDN18P56856 261 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 EEF1A1P68104 462 aaKnown RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 SIRPAP78324 504 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 IGLV3-21P80748 117 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TBL3Q12788 808 aaKnown RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 MLC1Q15049 377 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 EBPQ15125 230 aaKnown RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 GUSBP1Q15486 140 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TTLL9Q3SXZ7 439 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 EEF1A1P5Q5VTE0 462 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 LIPNQ5VXI9 398 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TIGD3Q6B0B8 471 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CYB5R2Q6BCY4 276 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 ADNP2Q6IQ32 1131 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 NEPROQ6NW34 567 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CASC4Q6P4E1 433 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 FRMD7Q6ZUT3 714 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 OR4N5Q8IXE1 308 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 KLHDC8AQ8IYD2 350 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 OTUD6BQ8N6M0 293 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 PPM1NQ8N819 430 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CNEP1R1Q8N9A8 125 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 BANPQ8N9N5 519 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TRPV3Q8NET8 790 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 SGMS2Q8NHU3 365 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 SLC5A11Q8WWX8 675 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 FIG4Q92562 907 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 PPWD1Q96BP3 646 aaKnown RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 CFAP36Q96G28 342 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TMEM41AQ96HV5 264 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TSNARE1Q96NA8 513 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 GPR21Q99679 349 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 HAUS8Q9BT25 410 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TRAF4Q9BUZ4 470 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TOR3AQ9H497 397 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 TEX10Q9NXF1 929 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-210ENST00000522843 WWOXQ9NZC7 414 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 DAPP1Q9UN19 280 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 COMMD10Q9Y6G5 202 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
SDCBP-210ENST00000522843 A0A1W2PPM1 405 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 A0A1W2PR48 441 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CCDC189A1A4V9 331 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 LRIT2A6NDA9 550 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 URADA6NGE7 173 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 ERI3O43414 337 aaKnown RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 B3GALT2O43825 422 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 FGF17O60258 216 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 SNX4O95219 450 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CRHP06850 196 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 GSTA1P08263 222 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF708P17019 499 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 PTNP21246 168 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 SAT1P21673 171 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 TBXA2RP21731 343 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 NR4A1P22736 598 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 DPP4P27487 766 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 GABRB3P28472 473 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CCT5P48643 541 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 COMPP49747 757 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 MANFP55145 182 aaKnown RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CBX1P83916 185 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 STX4Q12846 297 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 TRIM25Q14258 630 aaKnown RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 RPS6KA2Q15349 733 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 TOMM20Q15388 145 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 ADPRMQ3LIE5 342 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 HSP90AA5PQ58FG0 334 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 MRNIPQ6NTE8 343 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 STAC2Q6ZMT1 411 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 ZNF793Q6ZN11 406 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 LHFPL2Q6ZUX7 228 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 GRAMD2AQ8IUY3 354 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 DENND6AQ8IWF6 608 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 DND1Q8IYX4 353 aaKnown RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 SMAP2Q8WU79 429 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 EEF1AKMT1Q8WVE0 214 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 KCNJ9Q92806 393 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 UCN3Q969E3 161 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 C11orf24Q96F05 449 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 GPR22Q99680 433 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 RBBP8Q99708 897 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 CPPED1Q9BRF8 314 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-210ENST00000522843 SLC39A3Q9BRY0 314 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 RHNO1Q9BSD3 238 aa5.9□□□□□ -1.46
SDCBP-210ENST00000522843 FAM167BQ9BTA0 163 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms