RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 EXOSC7Q15024 291 aaKnown RBP15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 MICAQ29983 383 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 TMEM236Q5W0B7 351 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 PGM2L1Q6PCE3 622 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 PNPLA1Q8N8W4 532 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 ASB16Q96NS5 453 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 OR6C1Q96RD1 312 aa15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 CUEDC1Q9NWM3 386 aaPredicted RBP15.27■□□□□ 0.04
PCDHA3-201ENST00000522353 MAS1P04201 325 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 ADIPOR2Q86V24 386 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 STOML3Q8TAV4 291 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF300Q96RE9 604 aaPredicted RBP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 OR10A5Q9H207 317 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 OR10A2Q9H208 303 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF696Q9H7X3 374 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 NMNAT1Q9HAN9 279 aaPredicted RBP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 UBE2J1Q9Y385 318 aaPredicted RBP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 KIAA0513O60268 411 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 EGFP01133 1207 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 CNR2P34972 360 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 UGT8Q16880 541 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 RNASE10Q5GAN6 216 aaKnown RBP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 AWAT2Q6E213 333 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 Q8N402 240 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 RRNAD1Q96FB5 475 aaKnown RBP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 PRRC1Q96M27 445 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 USB1Q9BQ65 265 aaKnown RBP15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 BEX2Q9BXY8 128 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 BEX1Q9HBH7 125 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 NUP50Q9UKX7 468 aa15.27■□□□□ 0.03
PCDHA3-201ENST00000522353 SLC1A7O00341 560 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 NME4O00746 187 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 DENRO43583 198 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 BMP2P12643 396 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 IST1P53990 364 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM52BQ4KMG9 183 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 GALNT11Q8NCW6 608 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 NETO1Q8TDF5 533 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 AMDHD1Q96NU7 426 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 OR4K3Q96R72 315 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 SYT3Q9BQG1 590 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 SPHK1Q9NYA1 384 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 PCDH17O14917 1159 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 SMAD9O15198 467 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 SFTPBP07988 381 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 INHBCP55103 352 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 AIMP2Q13155 320 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM31Q5JXX7 168 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 PARM1Q6UWI2 310 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM178AQ8NBL3 297 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 EPHX3Q9H6B9 360 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 IER3IP1Q9Y5U9 82 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 GABRR3A8MPY1 467 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 TNFRSF10CO14798 259 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 CD97P48960 835 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 SSR4P51571 173 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 MRPL41Q8IXM3 137 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 OR5D16Q8NGK9 328 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 MYADMQ96S97 322 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 TAS2R8Q9NYW2 309 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 KLKB1P03952 638 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 PRDX3P30048 256 aaKnown RBP15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 MAN2A2P49641 1150 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 GPR139Q6DWJ6 353 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 CENPSQ8N2Z9 138 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 OR5J2Q8NH18 312 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 UCN3Q969E3 161 aa15.26■□□□□ 0.03
PCDHA3-201ENST00000522353 CD8B2A6NJW9 211 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 MRPL33O75394 65 aaKnown RBP15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 IFNA5P01569 189 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 CD8BP10966 210 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 CHRNB4P30926 498 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ACTBP60709 375 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ACTG1P63261 375 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 GARNL3Q5VVW2 1013 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 MISPQ8IVT2 679 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ACOT11Q8WXI4 607 aaPredicted RBP15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SYT4Q9H2B2 425 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SMOXQ9NWM0 555 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 MMP17Q9ULZ9 603 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 M0R036 132 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 M0R233 179 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ARNTLO00327 626 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 HTR3BO95264 441 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 S100A2P29034 98 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 DCTP40126 519 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SOX3P41225 446 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 AKR1C2P52895 323 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 GPLD1P80108 840 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 PIGFQ07326 219 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 C3orf38Q5JPI3 329 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 CTSL3PQ5NE16 218 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 CPOQ8IVL8 374 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SLC35F2Q8IXU6 374 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 UBALD2Q8IYN6 164 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SYT14Q8NB59 555 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 RAB39BQ96DA2 213 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms