RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 SH3GL2Q99962 352 aa16.14■□□□□ 0.17
TRAPPC9-211ENST00000521700 KLHDC3Q9BQ90 382 aa16.14■□□□□ 0.17
TRAPPC9-211ENST00000521700 HOXD1Q9GZZ0 328 aa16.14■□□□□ 0.17
TRAPPC9-211ENST00000521700 VDAC3Q9Y277 283 aa16.14■□□□□ 0.17
TRAPPC9-211ENST00000521700 GPR45Q9Y5Y3 372 aa16.14■□□□□ 0.17
TRAPPC9-211ENST00000521700 LRBAP50851 2863 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 E9PBE3 544 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 NPIPB9F8W1W9 429 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 H3BML4 177 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZNF195O14628 629 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 TGM6O95932 706 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 IL18BPO95998 194 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 UQCRC2P22695 453 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 IL12AP29459 219 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 S100A3P33764 101 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 OPRM1P35372 400 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 ASCL1P50553 236 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 ATP12AP54707 1039 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 CLDN20P56880 219 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 SNTB1Q13884 538 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 DPY19L1Q2PZI1 675 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 FBXL19-AS1Q494R0 122 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 CHMP1BQ7LBR1 199 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 MAVSQ7Z434 540 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 MEIOBQ8N635 442 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 ACTRT2Q8TDY3 377 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 INTS12Q96CB8 462 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 MAELQ96JY0 434 aaKnown RBP16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 SLC35G5Q96KT7 338 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 ATP6V1G3Q96LB4 118 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 NPAS1Q99742 590 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 MCCC2Q9HCC0 563 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 L3MBTL1Q9Y468 752 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 DCHS2Q6V1P9 2916 aa16.13■□□□□ 0.17
TRAPPC9-211ENST00000521700 CSMD1Q96PZ7 3565 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 A0A087WZY1 265 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 DUXAA6NLW8 204 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 C9JVG2 144 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 UQCRC1P31930 480 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 RNF144AP50876 292 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 CASP9P55211 416 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 EEFSECP57772 596 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 FLYWCH1Q4VC44 716 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 SLC9B1Q4ZJI4 515 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 TTMPQ5BVD1 217 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 NXNQ6DKJ4 435 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 GRAMD2AQ8IUY3 354 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 CHDHQ8NE62 594 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 B4GALNT2Q8NHY0 566 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 PIWIL2Q8TC59 973 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 PHOSPHO1Q8TCT1 267 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 MIPOL1Q8TD10 442 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 RNASE6Q93091 150 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZFP3Q96NJ6 502 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 MED17Q9NVC6 651 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 JKAMPQ9P055 326 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 KCNN3Q9UGI6 736 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 AP4B1Q9Y6B7 739 aa16.12■□□□□ 0.17
TRAPPC9-211ENST00000521700 ENO4A6NNW6 628 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 SEC14L5O43304 696 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 OIP5O43482 229 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 TNFRSF21O75509 655 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 C1QCP02747 245 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 PSMA4P25789 261 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZNF117Q03924 483 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 PLPPR5Q32ZL2 321 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 ARHGAP11BQ3KRB8 267 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 SAXO2Q658L1 398 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 CBLN3Q6UW01 205 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 MTERF4Q7Z6M4 381 aaKnown RBP16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 GCNT2Q8N0V5 402 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 GTPBP8Q8N3Z3 284 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZNF527Q8NB42 609 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 SMPDL3BQ92485 455 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 FIG4Q92562 907 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 CCDC115Q96NT0 180 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 SFXN3Q9BWM7 321 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 OR51I1Q9H343 314 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 SLC24A3Q9HC58 644 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 BTNL2Q9UIR0 455 aa16.11■□□□□ 0.17
TRAPPC9-211ENST00000521700 C7orf72A4D263 438 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 SLC22A20A6NK97 555 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 FCMRO60667 390 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 PGRP06401 933 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 OR12D1P0DN82 309 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZNF17P17021 662 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZNF41P51814 821 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 HEPHL1Q6MZM0 1159 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 OLIG3Q7RTU3 272 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 P4HA3Q7Z4N8 544 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 GGNQ86UU5 652 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 POC1BQ8TC44 478 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 RAB8BQ92930 207 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZBTB8AQ96BR9 441 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 NEURL3Q96EH8 262 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 LRRC46Q96FV0 321 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 ZNF845Q96IR2 970 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 MARK4Q96L34 752 aa16.1■□□□□ 0.17
TRAPPC9-211ENST00000521700 OR52B2Q96RD2 323 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms