RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 NAXEQ8NCW5 288 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 TNIP2Q8NFZ5 429 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 XAGE5Q8WWM1 108 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 CCDC28BQ9BUN5 200 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 EXD2Q9NVH0 621 aa18.68■□□□□ 0.58
TRIM35-203ENST00000521253 CD8B2A6NJW9 211 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 SHISA8B8ZZ34 492 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 RFXANKO14593 260 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 FCMRO60667 390 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 AGR2O95994 175 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 CEACAM8P31997 349 aaPredicted RBP18.67■□□□□ 0.58
TRIM35-203ENST00000521253 TIMP3P35625 211 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 KHKP50053 298 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 POLR2JP52435 117 aaKnown RBP18.67■□□□□ 0.58
TRIM35-203ENST00000521253 BCL2A1Q16548 175 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 ARHGAP11BQ3KRB8 267 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 GLYR1Q49A26 553 aaPredicted RBP18.67■□□□□ 0.58
TRIM35-203ENST00000521253 TIGD2Q4W5G0 525 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 C16orf62Q7Z3J2 963 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 RNF130Q86XS8 419 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 B4GALNT2Q8NHY0 566 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 PHOSPHO1Q8TCT1 267 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 RAB8BQ92930 207 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 KLHDC3Q9BQ90 382 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 PIGQQ9BRB3 760 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 CALHM2Q9HA72 323 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 KCNJ16Q9NPI9 418 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 VDAC3Q9Y277 283 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF337Q9Y3M9 751 aa18.67■□□□□ 0.58
TRIM35-203ENST00000521253 FAM234BA2RU67 622 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 HSPB2A8KAH6 182 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 HNRNPRO43390 633 aaKnown RBP18.66■□□□□ 0.58
TRIM35-203ENST00000521253 OIP5O43482 229 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 HCRTR2O43614 444 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 STX11O75558 287 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 POU3F2P20265 443 aaPredicted RBP18.66■□□□□ 0.58
TRIM35-203ENST00000521253 MRPL19P49406 292 aaKnown RBP18.66■□□□□ 0.58
TRIM35-203ENST00000521253 STX1BP61266 288 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF117Q03924 483 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 TFF3Q07654 80 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 FUT5Q11128 374 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 GPR68Q15743 365 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 HSPB2Q16082 182 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 TMEM44Q2T9K0 475 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 ATAD3BQ5T9A4 648 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 DNAJC14Q6Y2X3 702 aaPredicted RBP18.66■□□□□ 0.58
TRIM35-203ENST00000521253 MTERF4Q7Z6M4 381 aaKnown RBP18.66■□□□□ 0.58
TRIM35-203ENST00000521253 ADGRE4PQ86SQ3 457 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF614Q8N883 585 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 MARVELD3Q96A59 401 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 VPS33AQ96AX1 596 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 THOC1Q96FV9 657 aaKnown RBP18.66■□□□□ 0.58
TRIM35-203ENST00000521253 NMUR2Q9GZQ4 415 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 ZNF350Q9GZX5 532 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 SLC6A13Q9NSD5 602 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 MED17Q9NVC6 651 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 MKLN1Q9UL63 735 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 DTNAQ9Y4J8 743 aa18.66■□□□□ 0.58
TRIM35-203ENST00000521253 A0A087WZY1 265 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 MBD3L4A6NDZ8 208 aaPredicted RBP18.65■□□□□ 0.58
TRIM35-203ENST00000521253 MBD3L3A6NE82 208 aaPredicted RBP18.65■□□□□ 0.58
TRIM35-203ENST00000521253 MBD3L5A6NJ08 208 aaPredicted RBP18.65■□□□□ 0.58
TRIM35-203ENST00000521253 CLCA1A8K7I4 914 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 H3BNH8 94 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 LINC01387J3KSC0 135 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 HMGN4O00479 90 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 TNFRSF21O75509 655 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 IL2RAP01589 272 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 SNRPB2P08579 225 aaKnown RBP18.65■□□□□ 0.58
TRIM35-203ENST00000521253 PEPDP12955 493 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 PDZK1Q5T2W1 519 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 CBLN3Q6UW01 205 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 PLXDC2Q6UX71 529 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 MSANTD1Q6ZTZ1 278 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 UBQLNLQ8IYU4 475 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 C9orf106Q8NAJ2 232 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 MBD3L2Q8NHZ7 208 aaPredicted RBP18.65■□□□□ 0.58
TRIM35-203ENST00000521253 NPAS1Q99742 590 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 RMND5AQ9H871 391 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 KCNE5Q9UJ90 142 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 CARD8Q9Y2G2 431 aa18.65■□□□□ 0.58
TRIM35-203ENST00000521253 DCHS2Q6V1P9 2916 aa18.64■□□□□ 0.58
TRIM35-203ENST00000521253 CENPVL1A0A0U1RR11 272 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 PRAMEF27A3QJZ7 478 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 H0YC42 278 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 H3BML4 177 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 EDF1O60869 148 aaKnown RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 COX6B1P14854 86 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF17P17021 662 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF41P51814 821 aaPredicted RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF136P52737 540 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 TPD52P55327 224 aaPredicted RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 CLDN15P56746 228 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ZNF141Q15928 474 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 PLPPR5Q32ZL2 321 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 NDUFAF6Q330K2 333 aa18.64■□□□□ 0.57
TRIM35-203ENST00000521253 TYW3Q6IPR3 259 aaKnown RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 GTPBP8Q8N3Z3 284 aaPredicted RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 PNPT1Q8TCS8 783 aaKnown RBP18.64■□□□□ 0.57
TRIM35-203ENST00000521253 ZFP90Q8TF47 636 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms