RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SCDO00767 359 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 ADAMDEC1O15204 470 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 NPHS1O60500 1241 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 SS18L1O75177 396 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 PLGP00747 810 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 HPGDP15428 266 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 DDX5P17844 614 aaKnown RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 IL11P20809 199 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 EFNA1P20827 205 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 LOXP28300 417 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 ADSLP30566 484 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 ZNF41P51814 821 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 RAC1P63000 192 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 EXOC3L2Q2M3D2 409 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 UGT3A2Q3SY77 523 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 CCNJQ5T5M9 372 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 CPTPQ5TA50 214 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 LRIG3Q6UXM1 1119 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 P3H2Q8IVL5 708 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 COX18Q8N8Q8 333 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 FAM120BQ96EK7 910 aaKnown RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 OTUB1Q96FW1 271 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 SH3YL1Q96HL8 342 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 APOPT1Q96IL0 206 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 RNF145Q96MT1 663 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 SIRT3Q9NTG7 399 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 ZCCHC3Q9NUD5 404 aaKnown RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 ATP6V1HQ9UI12 483 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 MCTS1Q9ULC4 181 aaKnown RBP17.6■□□□□ 0.41
PABPC1-215ENST00000520804 TRAF6Q9Y4K3 522 aa17.6■□□□□ 0.41
PABPC1-215ENST00000520804 UQCRHLA0A096LP55 91 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 A0A1W2PQD3 144 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 PIP5K1BO14986 540 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 CXCL13O43927 109 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 HSPA4LO95757 839 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 OPN1LWP04000 364 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 ALDH3A1P30838 453 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 HPCAL1P37235 193 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 CTBP2P56545 445 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 LTBQ06643 244 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 ARL13AQ5H913 290 aaPredicted RBP17.59■□□□□ 0.41
PABPC1-215ENST00000520804 Q5PR19 223 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 C20orf204Q6ZNR8 217 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 ESPNLQ6ZVH7 1005 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 BANPQ8N9N5 519 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 OR2V1Q8NHB1 315 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 B4GALNT2Q8NHY0 566 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 POC1BQ8TC44 478 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 JADE3Q92613 823 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 STACQ99469 402 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 CCL19Q99731 98 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 KLHDC3Q9BQ90 382 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 BTBD2Q9BX70 525 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 DUSP22Q9NRW4 184 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 GLRX2Q9NS18 164 aa17.59■□□□□ 0.41
PABPC1-215ENST00000520804 A0A0J9YW62 118 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 TLDC2A0PJX2 215 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 TMEM114B3SHH9 223 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 TNFSF11O14788 317 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 SCAMP2O15127 329 aaKnown RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 SYNGR4O95473 234 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 HMGN2P05204 90 aaKnown RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 THBDP07204 575 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 PPP3CBP16298 524 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 RPL3P39023 403 aaKnown RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 POU6F2P78424 691 aaPredicted RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 LASP1Q14847 261 aaKnown RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 CD226Q15762 336 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 PPP3R2Q96LZ3 170 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 PIGUQ9H490 435 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 TMEM185BQ9H7F4 350 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 ZNF395Q9H8N7 513 aaPredicted RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 EML4Q9HC35 981 aaKnown RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 GIN1Q9NXP7 522 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 GIMAP2Q9UG22 337 aa17.58■□□□□ 0.4
PABPC1-215ENST00000520804 RAI1Q7Z5J4 1906 aaPredicted RBP17.58■□□□□ 0.4
PABPC1-215ENST00000520804 LINGO3P0C6S8 592 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 ME2P23368 584 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 MAPK1P28482 360 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 XKR7Q5GH72 579 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 HBMQ6B0K9 141 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 PRSS57Q6UWY2 283 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 STAC2Q6ZMT1 411 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 Q71RC1 249 aaPredicted RBP17.57■□□□□ 0.4
PABPC1-215ENST00000520804 TRABD2AQ86V40 505 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 OR7A2PQ8NGA2 310 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 CDS1Q92903 461 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 MECRQ9BV79 373 aa17.57■□□□□ 0.4
PABPC1-215ENST00000520804 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.56■□□□□ 0.4
PABPC1-215ENST00000520804 PEX11AO75192 247 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 LAMP1P11279 417 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 EIF1P41567 113 aaKnown RBP17.56■□□□□ 0.4
PABPC1-215ENST00000520804 BEX5Q5H9J7 111 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 PDSS1Q5T2R2 415 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 CDC73Q6P1J9 531 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 CLEC9AQ6UXN8 241 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 MTERF4Q7Z6M4 381 aaKnown RBP17.56■□□□□ 0.4
PABPC1-215ENST00000520804 LILRA2Q8N149 483 aa17.56■□□□□ 0.4
PABPC1-215ENST00000520804 RIBC1Q8N443 379 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms