RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 C6orf10Q5SRN2 563 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 OLIG3Q7RTU3 272 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 GCNT2Q8N0V5 402 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 NAXEQ8NCW5 288 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 FAM110BQ8TC76 370 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 ZPLD1Q8TCW7 415 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 RAB8BQ92930 207 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
VEGFA-221ENST00000520265 INPP5KQ9BT40 448 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 PINK1Q9BXM7 581 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 TMEM185BQ9H7F4 350 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 VIPAS39Q9H9C1 493 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CALHM2Q9HA72 323 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 STOML1Q9UBI4 398 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CARD8Q9Y2G2 431 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 MRPS18CQ9Y3D5 142 aaKnown RBP12.82□□□□□ -0.36
VEGFA-221ENST00000520265 GPR45Q9Y5Y3 372 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 NBPF19A0A087WUL8 3843 aa12.82□□□□□ -0.36
VEGFA-221ENST00000520265 CCDC154A6NI56 674 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 SLC22A20A6NK97 555 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 H0YC42 278 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 RFXANKO14593 260 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 EIF1AYO14602 144 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 TNFRSF21O75509 655 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 AGR2O95994 175 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 AK1P00568 194 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 OPN1LWP04000 364 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 NGFRP08138 427 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF708P17019 499 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 ME2P23368 584 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 CTSSP25774 331 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 MSX1P28360 303 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 IL12AP29459 219 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 TIMP3P35625 211 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 ANXA11P50995 505 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 TPD52P55327 224 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 CLDN18P56856 261 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 EEFSECP57772 596 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 RPS3AP61247 264 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 PHC1P78364 1004 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 SNTB1Q13884 538 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 GSTA3Q16772 222 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 TIGD2Q4W5G0 525 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 PDCD4Q53EL6 469 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 PDZK1Q5T2W1 519 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 HMGN2P46Q86SG4 172 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 MIER2Q8N344 545 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 CNEP1R1Q8N9A8 125 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 GLB1L3Q8NCI6 653 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 GOT1L1Q8NHS2 421 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 ACTRT2Q8TDY3 377 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 INTS12Q96CB8 462 aaKnown RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 RNF145Q96MT1 663 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 C7orf26Q96N11 449 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 SDF2Q99470 211 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 TM9SF2Q99805 663 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 SERHL2Q9H4I8 314 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 TCF7L2Q9NQB0 619 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 NPDC1Q9NQX5 325 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-221ENST00000520265 MED17Q9NVC6 651 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 BTNL2Q9UIR0 455 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 MKLN1Q9UL63 735 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
VEGFA-221ENST00000520265 A0A087WZY1 265 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 MBD3L4A6NDZ8 208 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-221ENST00000520265 MBD3L3A6NE82 208 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-221ENST00000520265 MBD3L5A6NJ08 208 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-221ENST00000520265 STX11O75558 287 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 SMNDC1O75940 238 aaKnown RBP eCLIP12.8□□□□□ -0.364e-7■■□□□ 12.8
VEGFA-221ENST00000520265 UBL4AP11441 157 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 OPRM1P35372 400 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 CDKN2CP42773 168 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 EIF1AXP47813 144 aaKnown RBP12.8□□□□□ -0.36
VEGFA-221ENST00000520265 ASCL1P50553 236 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF136P52737 540 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 ATP12AP54707 1039 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 B3GALT5-AS1P59052 145 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 SIRPAP78324 504 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 ZNF117Q03924 483 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 RNF130Q86XS8 419 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 RELL2Q8NC24 303 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-221ENST00000520265 ATP6V1C2Q8NEY4 427 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 OR9I1Q8NGQ6 314 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 MBD3L2Q8NHZ7 208 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-221ENST00000520265 CCDC115Q96NT0 180 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 SH3GL2Q99962 352 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 RMND5AQ9H871 391 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 WDR45Q9Y484 360 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 DTNAQ9Y4J8 743 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 CRYBG3Q68DQ2 2970 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 KIAA1549Q9HCM3 1950 aa12.8□□□□□ -0.36
VEGFA-221ENST00000520265 IGLV3-32A0A0A0MS00 114 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 LINC01387J3KSC0 135 aa12.79□□□□□ -0.36
VEGFA-221ENST00000520265 NR5A2O00482 541 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms