RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 SLMAPQ14BN4 828 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 EFTUD2Q15029 972 aaKnown RBP eCLIP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 UAP1Q16222 522 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 TCTE1Q5JU00 501 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 FRG2Q64ET8 278 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 CAPN13Q6MZZ7 669 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 FAM199XQ6PEV8 388 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 KCTD18Q6PI47 426 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 MBOAT1Q6ZNC8 495 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 RAPH1Q70E73 1250 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 ADCK2Q7Z695 626 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 BEST3Q8N1M1 668 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 OR2AK2Q8NG84 335 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 CT55Q8WUE5 264 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 ANKRD49Q8WVL7 239 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 ATL1Q8WXF7 558 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 RHBDF1Q96CC6 855 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 GRAMD2BQ96HH9 432 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 MED30Q96HR3 178 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 THOC3Q96J01 351 aaKnown RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 SLC45A3Q96JT2 553 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 ATG10Q9H0Y0 220 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 AKIRIN1Q9H9L7 192 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 SEBOXQ9HB31 216 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 ANKMY1Q9P2S6 941 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 RALYQ9UKM9 306 aaKnown RBP6.39□□□□□ -1.39
SDCBP-208ENST00000520228 IKZF3Q9UKT9 509 aa6.39□□□□□ -1.39
SDCBP-208ENST00000520228 IGSF10Q6WRI0 2623 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CFAP47Q6ZTR5 3102 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ZFHX4Q86UP3 3567 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 IGKV1-8A0A0C4DH67 115 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 A0A0J9YVX5 310 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 C9J4A7 227 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 WISP3O95389 354 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CLDN14O95500 239 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 T-ENOLP0DO92 83 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 PRKAR1AP10644 381 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 HRH2P25021 359 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 PTPN4P29074 926 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 BDKRB2P30411 391 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 VSX2P58304 361 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ATP6V0D1P61421 351 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 TBPL1P62380 186 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 DCDP81605 110 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 RELAQ04206 551 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF155Q12901 538 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 DLG1Q12959 904 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 KEAP1Q14145 624 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 TSNQ15631 228 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ZKSCAN8Q15776 578 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CTF1Q16619 201 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 PPP1R3AQ16821 1122 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 NKAIN1Q4KMZ8 207 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 LRIF1Q5T3J3 769 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 C1orf189Q5VU69 101 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 FRMPD2BQ6IN97 320 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 LCN10Q6JVE6 187 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 RHBDD2Q6NTF9 364 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 WDR73Q6P4I2 378 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 TMEM154Q6P9G4 183 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 SBSNQ6UWP8 590 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CFAP77Q6ZQR2 320 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 FRA10AC1Q70Z53 315 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 MEPCEQ7L2J0 689 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CMC1Q7Z7K0 106 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ADAMTSL2Q86TH1 951 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 PAQR7Q86WK9 346 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 C17orf64Q86WR6 236 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 TTC29Q8NA56 475 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 STARD8Q92502 1023 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 RERGQ96A58 199 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 PYCR2Q96C36 320 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF285Q96NJ3 590 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 PRAP1Q96NZ9 151 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 C17orf62Q9BQA9 187 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 FUT8Q9BYC5 575 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 DERL2Q9GZP9 239 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CDC42EP4Q9H3Q1 356 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 ACTL8Q9H568 366 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 STARD5Q9NSY2 213 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 CUTCQ9NTM9 273 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 TXLNGQ9NUQ3 528 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 DHCR7Q9UBM7 475 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 FARSAQ9Y285 508 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 OARD1Q9Y530 152 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 MRPS18BQ9Y676 258 aaKnown RBP6.38□□□□□ -1.39
SDCBP-208ENST00000520228 IKBKGQ9Y6K9 419 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 MYLKQ15746 1914 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 NBEAQ8NFP9 2946 aa6.38□□□□□ -1.39
SDCBP-208ENST00000520228 IGKV2D-30A0A075B6S6 120 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 A0A087WUV0 522 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 A0A1B0GX78 115 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 HYKKA2RU49 373 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 PTGES3LE9PB15 166 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 H0YGG7 62 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 AP3D1O14617 1153 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 HAT1O14929 419 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 ZNF500O60304 480 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CREG1O75629 220 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 KDM4BO94953 1096 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms