RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-213	ENST00000519553	ONECUT1	Q9UBC0	465 aa		4.17	□□□□□ -1.74
PTPN12-213	ENST00000519553	CRLS1	Q9UJA2	301 aa		4.17	□□□□□ -1.74
PTPN12-213	ENST00000519553	HOOK1	Q9UJC3	728 aa	Known RBP	4.17	□□□□□ -1.74
PTPN12-213	ENST00000519553	RIMS3	Q9UJD0	308 aa		4.17	□□□□□ -1.74
PTPN12-213	ENST00000519553	PPIAL4A	Q9Y536	164 aa		4.17	□□□□□ -1.74
PTPN12-213	ENST00000519553		H0Y9J4	135 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	ANP32D	O95626	131 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	SEMG1	P04279	462 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	CD1E	P15812	388 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	ADORA2B	P29275	332 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	RPL29	P47914	159 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	OSTN	P61366	133 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	MRPS11	P82912	194 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	EGFEM1P	Q0D2K5	195 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	ST3GAL3	Q11203	375 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	TRIP10	Q15642	601 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	KYAT1	Q16773	422 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	C12orf60	Q5U649	245 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	OR8G2P	Q6IF36	304 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	NIPAL3	Q6P499	406 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	C17orf82	Q86X59	251 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	GCNT2	Q8N0V5	402 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	LINC01561	Q8N1V8	128 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	OR2L5	Q8NG80	312 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	NANP	Q8TBE9	248 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	TRUB1	Q8WWH5	349 aa	Known RBP	4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	IL4I1	Q96RQ9	567 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	ZNF184	Q99676	751 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	OR1A1	Q9P1Q5	309 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	ANAPC7	Q9UJX3	599 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	ZNF221	Q9UK13	617 aa		4.16	□□□□□ -1.74
PTPN12-213	ENST00000519553	LYPLA1	O75608	230 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	PDHB	P11177	359 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	IGLL1	P15814	213 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	ATP5A1	P25705	553 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	SLC26A2	P50443	739 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	GNB2	P62879	340 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	CELF3	Q5SZQ8	465 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	SCYL2	Q6P3W7	929 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	LRRC70	Q7Z2Q7	622 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	OR2A12	Q8NGT7	310 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	SDSL	Q96GA7	329 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	MRPL13	Q9BYD1	178 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	MRPL39	Q9NYK5	338 aa	Known RBP	4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	RDH8	Q9NYR8	311 aa		4.15	□□□□□ -1.75
PTPN12-213	ENST00000519553	COL16A1	Q07092	1604 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	LOC100131303	A0A0U1RQF7	123 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553		A0A1W2PNU3	283 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	OR4F21	O95013	312 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	AKR7A3	O95154	331 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	OPN1LW	P04000	364 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	BDKRB1	P46663	353 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	MTTP	P55157	894 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	NTHL1	P78549	312 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	BDH1	Q02338	343 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	RGS1	Q08116	209 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	PDZK1IP1	Q13113	114 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	ZNF311	Q5JNZ3	666 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	SETD7	Q8WTS6	366 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	IMMP1L	Q96LU5	166 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	FICD	Q9BVA6	458 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	PPDPF	Q9H3Y8	114 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	RHOJ	Q9H4E5	214 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	ADAM22	Q9P0K1	906 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	ACTR3B	Q9P1U1	418 aa		4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	XPO7	Q9UIA9	1087 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-213	ENST00000519553	CHD4	Q14839	1912 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553		A0A1B0GUL7	405 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	C19orf81	C9J6K1	198 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	TRIM16	O95361	564 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	HBQ1	P09105	142 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	VDAC1	P21796	283 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	DHPS	P49366	369 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	NAPA	P54920	295 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	AANAT	Q16613	207 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	TIGIT	Q495A1	244 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	ARSK	Q6UWY0	536 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	PPP1R27	Q86WC6	154 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	BBS1	Q8NFJ9	593 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	CNIH3	Q8TBE1	160 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	IL1F10	Q8WWZ1	152 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	FGGY	Q96C11	551 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	CALHM2	Q9HA72	323 aa		4.13	□□□□□ -1.75
PTPN12-213	ENST00000519553	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	PANO1	I0J062	215 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	JAK2	O60674	1132 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	ACTL6A	O96019	429 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	ELAVL3	Q14576	367 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	LRRC36	Q1X8D7	754 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	CCDC14	Q49A88	953 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	OTP	Q5XKR4	325 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	LRRC8B	Q6P9F7	803 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	CBLN3	Q6UW01	205 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	CENPU	Q71F23	418 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	TMEM179B	Q7Z7N9	219 aa		4.12	□□□□□ -1.75
PTPN12-213	ENST00000519553	SKA3	Q8IX90	412 aa		4.12	□□□□□ -1.75

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