RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 RNF31Q96EP0 1072 aa10.54□□□□□ -0.72
PCDHGB4-201ENST00000519479 WASH6PQ9NQA3 447 aa10.54□□□□□ -0.72
PCDHGB4-201ENST00000519479 TBC1D29Q9UFV1 150 aa10.54□□□□□ -0.72
PCDHGB4-201ENST00000519479 GRIP1Q9Y3R0 1128 aa10.54□□□□□ -0.72
PCDHGB4-201ENST00000519479 PRAMEF26H0Y7S4 382 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 PUM1Q14671 1186 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 MRPL2Q5T653 305 aaKnown RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 RABEPKQ7Z6M1 372 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF547Q8IVP9 402 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR1E3Q8WZA6 343 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 RFT1Q96AA3 541 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF717Q9BY31 904 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 PFDN2Q9UHV9 154 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 MICAL3Q7RTP6 2002 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TRBV2A0A0J9YWF9 115 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 A0A1W2PRQ8 180 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 SERTM1A2A2V5 107 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 H0Y8X5 98 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 GRPRP30550 384 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 SOX2P48431 317 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 DNASE1L1P49184 302 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 PDX1P52945 283 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 CTF1Q16619 201 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 NUP54Q7Z3B4 507 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 NLRP8Q86W28 1048 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR52R1Q8NGF1 315 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR2A1Q8NGT9 310 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 DYNC2LI1Q8TCX1 351 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 C1QTNF2Q9BXJ5 285 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 DPAGT1Q9H3H5 408 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF226Q9NYT6 803 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 KCMF1Q9P0J7 381 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 CPED1A4D0V7 1026 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZAR1LA6NP61 321 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 SYT5O00445 386 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 YY2O15391 372 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 EEF1E1O43324 174 aaKnown RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 GIMD1P0DJR0 217 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ADPRHP54922 357 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 NRG3P56975 720 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 GPR18Q14330 331 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR1Q1Q15612 314 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 AKIRIN2Q53H80 203 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 COL13A1Q5TAT6 717 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 CNIH2Q6PI25 160 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TTLL10Q6ZVT0 673 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 SPATC1Q76KD6 591 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 FAM83FQ8NEG4 500 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR9A4Q8NGU2 314 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 GOT1L1Q8NHS2 421 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 EFHD2Q96C19 240 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZDHHC12Q96GR4 267 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TMEM246Q9BRR3 403 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 MKRN2Q9H000 416 aaKnown RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 SRA1Q9HD15 236 aaKnown RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 MAU2Q9Y6X3 613 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TRAV6A0A075B6T7 132 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TRAV27A0A087WT01 109 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 KIR2DS5A0A0G2JLQ3 304 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 A0A0G2JNG1 304 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ANKRD33BA6NCL7 494 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 KIR2DS3K7RE56 304 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 CSO75390 466 aaKnown RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 HTR1AP08908 422 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 SNRPGP62308 76 aaKnown RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 KIR2DS5Q14953 304 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TRAM1Q15629 374 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 DHRS4L2Q6PKH6 230 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 XKRXQ6PP77 449 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 FKBP10Q96AY3 582 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 S100A13Q99584 98 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 GDF15Q99988 308 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 TTYH1Q9H313 450 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 NANSQ9NR45 359 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 RABL2BQ9UNT1 228 aa10.53□□□□□ -0.72
PCDHGB4-201ENST00000519479 ARID1BQ8NFD5 2236 aaPredicted RBP10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 SLC9B1P1A6NJY1 282 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR2B3O76000 313 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 LGI1O95970 557 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 IL1AP01583 271 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 GYPBP06028 91 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF24P17028 368 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 CXCL12P48061 93 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 AGBL4Q5VU57 503 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZCCHC12Q6PEW1 402 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 TMEM64Q6YI46 380 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR6N2Q8NGY6 317 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZMYND19Q96E35 227 aaPredicted RBP10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 YIPF6Q96EC8 236 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 TOE1Q96GM8 510 aaKnown RBP10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 ABCG5Q9H222 651 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 LAMP5Q9UJQ1 280 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 ICKQ9UPZ9 632 aa10.52□□□□□ -0.72
PCDHGB4-201ENST00000519479 A0A075B6Q4 140 aa10.52□□□□□ -0.73
PCDHGB4-201ENST00000519479 A0A1W2PQ09 198 aa10.52□□□□□ -0.73
PCDHGB4-201ENST00000519479 C11orf98E9PRG8 122 aa10.52□□□□□ -0.73
PCDHGB4-201ENST00000519479 PROS1P07225 676 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms