RNA–Protein interactions for RNA: ENST00000518668.5

DENND3-208, Transcript of DENN domain containing 3, human

TSL 5

Gene DENND3, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-208	ENST00000518668	OR52D1	Q9H346	318 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	FAM86C1	Q9NVL1	165 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	NUBP2	Q9Y5Y2	271 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	LOXHD1	Q8IVV2	1947 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668		A0A1W2PPK0	400 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668		H3BSH0	61 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	GJB3	O75712	270 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	OPRL1	P41146	370 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	OLIG1	Q8TAK6	271 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	ARRDC3	Q96B67	414 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	LRRC46	Q96FV0	321 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	ANKRD19P	Q9H560	264 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	A4GALT	Q9NPC4	353 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	ZNF701	Q9NV72	531 aa	Predicted RBP	13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	GSKIP	Q9P0R6	139 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	CARD8	Q9Y2G2	431 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	IER3IP1	Q9Y5U9	82 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	SLX4	Q8IY92	1834 aa		13.27	□□□□□ -0.28
DENND3-208	ENST00000518668	FURIN	P09958	794 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	PDE7A	Q13946	482 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	ENTPD8	Q5MY95	495 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	MANEA	Q5SRI9	462 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	CARD17	Q5XLA6	110 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	C3orf33	Q6P1S2	294 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	IL22RA1	Q8N6P7	574 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	NDNF	Q8TB73	568 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	LYSMD1	Q96S90	227 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	TMEM38A	Q9H6F2	299 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	PRSS16	Q9NQE7	514 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	AXIN1	O15169	862 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	VNN2	O95498	520 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	MAS1	P04201	325 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	CSF1	P09603	554 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	GM2A	P17900	193 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	XCR1	P46094	333 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	AIMP2	Q13155	320 aa	Known RBP	13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	SSX6	Q7RTT6	188 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	CRB3	Q9BUF7	120 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	MS4A8	Q9BY19	250 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	TP63	Q9H3D4	680 aa	Predicted RBP	13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	SPEF1	Q9Y4P9	236 aa		13.27	□□□□□ -0.29
DENND3-208	ENST00000518668	PRSS3	P35030	304 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	AFMID	Q63HM1	303 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	TMEM184A	Q6ZMB5	413 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	OR2T11	Q8NH01	316 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	LKAAEAR1	Q8TD35	194 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ZFP90	Q8TF47	636 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	MUL1	Q969V5	352 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	INIP	Q9NRY2	104 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	KCNN3	Q9UGI6	736 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ERVK-19	Q9WJR5	959 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ACOT8	O14734	319 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	HOXC11	O43248	304 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SYT7	O43581	403 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ATG12	O94817	140 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	AIFM1	O95831	613 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	RNF144A	P50876	292 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	TMEM244	Q5VVB8	128 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	PRAMEF8	Q5VWM4	474 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	PRAMEF7	Q5VXH5	474 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	MAVS	Q7Z434	540 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	FOXRED2	Q8IWF2	684 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ASB17	Q8WXJ9	295 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	NECAB3	Q96P71	396 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	INTS14	Q96SY0	518 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	VRK1	Q99986	396 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SLC9B1P1	A6NJY1	282 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	GPR39	O43194	453 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	GPRIN2	O60269	458 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ATE1	O95260	518 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CD38	P28907	300 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	GRPR	P30550	384 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	PTGS2	P35354	604 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CLDN2	P57739	230 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CYCS	P99999	105 aa	Known RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SELPLG	Q14242	412 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	METTL11B	Q5VVY1	283 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	MSLNL	Q96KJ4	702 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SMIM14	Q96QK8	99 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	BEX2	Q9BXY8	128 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CXCL16	Q9H2A7	254 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	BEX1	Q9HBH7	125 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	TAAR2	Q9P1P5	351 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	NUP50	Q9UKX7	468 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	HIF3A	Q9Y2N7	669 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CXorf51A	A0A1B0GTR3	108 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	GIPR	P48546	466 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	XKR7	Q5GH72	579 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	BEST3	Q8N1M1	668 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	NEURL3	Q96EH8	262 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CCDC120	Q96HB5	630 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	TREX2	Q9BQ50	279 aa	Predicted RBP	13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	SYT3	Q9BQG1	590 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	ABRACL	Q9P1F3	81 aa		13.26	□□□□□ -0.29
DENND3-208	ENST00000518668	CD300A	Q9UGN4	299 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms