RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 LEF1Q9UJU2 399 aaPredicted RBP13.22□□□□□ -0.29
TOP1MT-203ENST00000517857 DTNAQ9Y4J8 743 aa13.22□□□□□ -0.29
TOP1MT-203ENST00000517857 PCDHB14Q9Y5E9 798 aa13.22□□□□□ -0.29
TOP1MT-203ENST00000517857 MED12Q93074 2177 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 NCOA6Q14686 2063 aaPredicted RBP13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 A0A1W2PP18 115 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 TMEM247A6NEH6 219 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 H0Y3Z8 333 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 CLIC1O00299 241 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 KIAA0513O60268 411 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 FCMRO60667 390 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 CYP7B1O75881 506 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 H6PDO95479 791 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 UBL4AP11441 157 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 MSX1P28360 303 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 CCR4P51679 360 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 ADORA2A-AS1P86434 159 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 ZNF117Q03924 483 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 SRYQ05066 204 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 SYPL1Q16563 259 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 NDUFAF6Q330K2 333 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 KLHL26Q53HC5 615 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 NHSL2Q5HYW2 709 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 PAGE3Q5JUK9 113 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 TYW3Q6IPR3 259 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 B3GNT6Q6ZMB0 384 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 HMGN2P46Q86SG4 172 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 MRGPRGQ86SM5 289 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 ULK2Q8IYT8 1036 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 ANKFN1Q8N957 763 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 OR5M1Q8NGP8 315 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 ZNF317Q96PQ6 595 aaPredicted RBP13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 DMRTA2Q96SC8 542 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 FAM107BQ9H098 131 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 NSRP1Q9H0G5 558 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 MRGBPQ9NV56 204 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 CARD8Q9Y2G2 431 aa13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 MRPS18CQ9Y3D5 142 aaKnown RBP13.21□□□□□ -0.29
TOP1MT-203ENST00000517857 WIPF3A6NGB9 483 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 SERINC4A6NH21 518 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 H3BML4 177 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 ZIC3O60481 467 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 BCHEP06276 602 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 CD1EP15812 388 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 POU3F2P20265 443 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 MAGEA8P43361 318 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 GFRA1P56159 465 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 NUP107P57740 925 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 CHRNEQ04844 493 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 LRIF1Q5T3J3 769 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 ARSKQ6UWY0 536 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 UBQLNLQ8IYU4 475 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 ZNF808Q8N4W9 903 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 ITLN2Q8WWU7 325 aaPredicted RBP13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 SMPDL3BQ92485 455 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 TRNT1Q96Q11 434 aaKnown RBP13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 PIGQQ9BRB3 760 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 PRDM14Q9GZV8 571 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 COQ3Q9NZJ6 369 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 NDUFAF1Q9Y375 327 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 FAM215AQ9Y5M1 114 aa13.2□□□□□ -0.3
TOP1MT-203ENST00000517857 A0A087WZY1 265 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 CENPVL1A0A0U1RR11 272 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 OR2M5A3KFT3 312 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 PRAMEF27A3QJZ7 478 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SHISA8B8ZZ34 492 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 ZNF264O43296 627 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 OIP5O43482 229 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 UGT2B17O75795 530 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 CSTAP01040 98 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 CHRM4P08173 479 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SNRPB2P08579 225 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 HOXD4P09016 255 aaPredicted RBP13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 CHMP24386 653 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 PTGER4P35408 488 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 STARP49675 285 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 P2RX1P51575 399 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 MVDP53602 400 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 GYS2P54840 703 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SUMO3P55854 103 aaPredicted RBP13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 PMPCAQ10713 525 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SF3B4Q15427 424 aaKnown RBP eCLIP13.19□□□□□ -0.36e-6■■■■□ 26.3
TOP1MT-203ENST00000517857 ZNF141Q15928 474 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 LRRC74BQ6ZQY2 392 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 MARVELD2Q8N4S9 558 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 C10orf82Q8WW14 230 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 RND1Q92730 232 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SDCCAG3Q96C92 435 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 WDYHV1Q96HA8 205 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 TRIB1Q96RU8 372 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 QRSL1Q9H0R6 528 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 CACYBPQ9HB71 228 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms