RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 SLC39A1Q9NY26 324 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLEK2Q9NYT0 353 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBAKQ9NYW8 714 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MTCH1Q9NZJ7 389 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 KLRF1Q9NZS2 232 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ADAM22Q9P0K1 906 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSMC3IPQ9P2W1 217 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 GNG12Q9UBI6 72 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 UXTQ9UBK9 157 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 GHRLQ9UBU3 117 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTSFQ9UBX1 484 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CLN8Q9UBY8 286 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PISDQ9UG56 409 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MIOXQ9UGB7 285 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TUBGCP4Q9UGJ1 667 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL36AQ9UHA7 158 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ASIC3Q9UHC3 531 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CIDEBQ9UHD4 219 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSORS1C1Q9UIG5 152 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZDHHC2Q9UIJ5 367 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCNG2Q9UJ96 466 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 FBXL4Q9UKA2 621 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRTO4Q9UKD2 239 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PITPNC1Q9UKF7 332 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PILRAQ9UKJ1 303 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MAN1B1Q9UKM7 699 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 UTS2RQ9UKP6 389 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 NUP50Q9UKX7 468 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF346Q9UL40 294 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 EMCNQ9ULC0 261 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 VANGL2Q9ULK5 521 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBC1D24Q9ULP9 559 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 STAP1Q9ULZ2 295 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRPF19Q9UMS4 504 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PSMD13Q9UNM6 376 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DIMT1Q9UNQ2 313 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRELID1Q9Y255 219 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RASD1Q9Y272 281 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 WDR83OSQ9Y284 106 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 STARD10Q9Y365 291 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 DHRS7Q9Y394 339 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPIL1Q9Y3C6 166 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RHBDD3Q9Y3P4 386 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMED3Q9Y3Q3 217 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF175Q9Y473 711 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 HYOU1Q9Y4L1 999 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATG4BQ9Y4P1 393 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 WIPI2Q9Y4P8 454 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CSDC2Q9Y534 153 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZSCAN21Q9Y5A6 473 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAI2Q9Y5P3 530 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 ETV7Q9Y603 341 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PUS1Q9Y606 427 aaKnown RBP eCLIP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 FKBP7Q9Y680 259 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 COLEC10Q9Y6Z7 277 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 MROH7-TTC4A0A0A0MT08 1334 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PTPRCP08575 1304 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 AFF2P51816 1311 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 EVC2Q86UK5 1308 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PCDH11YQ9BZA8 1340 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 USP42Q9H9J4 1324 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SALL1Q9NSC2 1324 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRPPRCP42704 1394 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPAP1Q9BWH6 1393 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYNJ2O15056 1496 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 AQRO60306 1485 aaKnown RBP eCLIP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 COL3A1P02461 1466 aaPredicted RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLB1Q6P1J6 1458 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 SPATA31D1Q6ZQQ2 1576 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 PEG3Q9GZU2 1588 aa0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 CFAP65Q6ZU64 1925 aaKnown RBP0.52□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRBV5-3A0A0A0MS03 114 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NPIPA5A0A0B4J1W7 369 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A0G2JNG1 304 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A0J9YVX5 310 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TRBV5-5A0A0J9YX44 114 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TEX13DA0A0J9YY54 714 aaPredicted RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZCWPW2A0A1B0GU75 182 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 IQCMA0A1B0GVH7 501 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1W2PRF3 423 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 A0A1W2PRM7 423 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM213A2RRL7 107 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRIT2A6NDA9 550 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5K3A6NET4 321 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 FBLL1A6NHQ2 334 aaKnown RBP0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6C70A6NIJ9 312 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM210A6NLX4 147 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRC30A6NM36 301 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCT8L1PA6NM43 557 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 A6NNC1 897 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 PP2D1A8MPX8 630 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 A8MVM7 634 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARHGEF33A8MVX0 844 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 CENPBD1B2RD01 187 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF732B4DXR9 585 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCP10L2B9ZVM9 353 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 E5RGE8 158 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 NPIPA5E9PKD4 350 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNASEK-C17orf49H0YIS7 233 aa0.51□□□□□ -2.33
RNU4-54P-201ENST00000516428 H0YL77 283 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms