RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CXXC4Q9H2H0 198 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 UNC45AQ9H3U1 944 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 NOL11Q9H8H0 719 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 RPF1Q9H9Y2 349 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 GOLGA6AQ9NYA3 693 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 CNOT2Q9NZN8 540 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 VPS54Q9P1Q0 977 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TXNDC16Q9P2K2 825 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 SPRR3Q9UBC9 169 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 BTNL2Q9UIR0 455 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 PLAGL1Q9UM63 463 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 TMA7Q9Y2S6 64 aaKnown RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 L3MBTL1Q9Y468 752 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 COL4A3BPQ9Y5P4 624 aa-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 EP300Q09472 2414 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-542P-201ENST00000516405 PTPRQQ9UMZ3 2332 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 TRAV18A0A075B6X5 111 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 A0A0U1RQG5 324 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 E9PLD3 99 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CCSO14618 274 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 NPHP1O15259 732 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 PPM1GO15355 546 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CNMDO75829 334 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CPNE6O95741 557 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 OPN1MWP04001 364 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CD74P04233 296 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ASGR1P07306 291 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 OPN1MW2P0DN77 364 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 OPN1MW3P0DN78 364 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 GZMHP20718 246 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ACKR3P25106 362 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ADORA2BP29275 332 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 OTX1P32242 354 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 MATR3P43243 847 aaKnown RBP eCLIP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CRKLP46109 303 aaKnown RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 PAPOLAP51003 745 aaKnown RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 AK2P54819 239 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 NAP1L1P55209 391 aaKnown RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CCL23P55773 120 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 HAND2P61296 217 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 RAP1AP62834 184 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 POLR2LP62875 67 aaKnown RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 MRPS11P82912 194 aaKnown RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 UBXN1Q04323 297 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 FOLH1Q04609 750 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 GPR50Q13585 617 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 KCNJ11Q14654 390 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 BRD3Q15059 726 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 PPP2R5AQ15172 486 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CAMK4Q16566 473 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 IL31Q6EBC2 164 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF470Q6ECI4 717 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 CTRB2Q6GPI1 263 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 NAA16Q6N069 864 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ACSM5Q6NUN0 579 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 TOM1L2Q6ZVM7 507 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ENOSF1Q7L5Y1 443 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 OLIG3Q7RTU3 272 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 PHLDB2Q86SQ0 1253 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 TRIM69Q86WT6 500 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 MYO1HQ8N1T3 1032 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 SLC25A45Q8N413 288 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 OR13G1Q8NGZ3 307 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 NFKBIDQ8NI38 313 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 LINC01560Q8TB33 94 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 MOB3AQ96BX8 217 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 C19orf43Q9BQ61 176 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZSCAN5AQ9BUG6 496 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 RNF126Q9BV68 326 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF160Q9HCG1 818 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 MEPEQ9NQ76 525 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 TBC1D22BQ9NU19 505 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 HOXC10Q9NYD6 342 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 DCDC2Q9UHG0 476 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 UGT2A1Q9Y4X1 527 aa-1.71□□□□□ -2.68
RNU6-542P-201ENST00000516405 HEG1Q9ULI3 1381 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 USP6P35125 1406 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 TRGV2A0A075B6R0 118 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 IGHV3-66A0A0C4DH42 116 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 IGHV5-10-1A0A0J9YXX1 117 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 A0A1B0GUL7 405 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 ZNF716A6NP11 495 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 LY6LH3BQJ8 138 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 PTGESO14684 152 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 FCGR3BO75015 233 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 TBX10O75333 385 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 TSPAN9O75954 239 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CPSF4O95639 269 aaKnown RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 OLFM2O95897 454 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 GBAP04062 536 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 IFIT1P09914 478 aaKnown RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 HOXB8P17481 243 aaPredicted RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 RPL29P47914 159 aaKnown RBP-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 METAP1P53582 386 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CDH13P55290 713 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 UBE3AQ05086 875 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 CEACAM7Q14002 265 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 PTGISQ16647 500 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 GPAT3Q53EU6 434 aa-1.72□□□□□ -2.68
RNU6-542P-201ENST00000516405 LACTB2Q53H82 288 aaPredicted RBP-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms