RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 OMA1Q96E52 524 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 LMF1Q96S06 567 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ADOQ96SZ5 270 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF559Q9BR84 538 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MESP1Q9BRJ9 268 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FUZQ9BT04 418 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PRR14Q9BWN1 585 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NRSN2Q9GZP1 204 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ANKRD19PQ9H560 264 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PAPOLBQ9NRJ5 636 aaKnown RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PNPLA3Q9NST1 481 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MAN2C1Q9NTJ4 1040 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DNAJB12Q9NXW2 375 aaKnown RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UBAP1Q9NZ09 502 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TESQ9UGI8 421 aaKnown RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF223Q9UK11 482 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MGAT4BQ9UQ53 548 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC35A3Q9Y2D2 325 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NTNG1Q9Y2I2 539 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 HEATR5AQ86XA9 2040 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KNTC1P50748 2209 aa7.04□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SPAARA0A1B0GVQ0 90 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 A0A1W2PNU3 283 aaPredicted RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TRAPPC13A5PLN9 417 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C9orf172C9J069 976 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 H3BNH8 94 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 BCKDKO14874 412 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TSPAN2O60636 221 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ABCB7O75027 752 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ICOSLGO75144 302 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZFAND5O76080 213 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 DKK1O94907 266 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TNFAIP8O95379 198 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 UTS2O95399 124 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CLIC3O95833 236 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CSTAP01040 98 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GASTP01350 101 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RAB40ALP0C0E4 278 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FTH1P19P0C7X4 201 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CYP4B1P13584 511 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TCN2P20062 427 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ABCD3P28288 659 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 POLR2IP36954 125 aaKnown RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 IFNGR2P38484 337 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RPS6KA3P51812 740 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RPS15P62841 145 aaKnown RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MYBPC1Q00872 1141 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NPRL3Q12980 569 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KEAP1Q14145 624 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PCOLCEQ15113 449 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR1Q1Q15612 314 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 KLHL26Q53HC5 615 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FAM69BQ5VUD6 431 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF770Q6IQ21 691 aaPredicted RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF613Q6PF04 617 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF730Q6ZMV8 503 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 RRM2BQ7LG56 351 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TIPARPQ7Z3E1 657 aaKnown RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GDF7Q7Z4P5 450 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 THAP5Q7Z6K1 395 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF440Q8IYI8 595 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 C8orf59Q8N0T1 100 aaPredicted RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ESX1Q8N693 406 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SETD9Q8NE22 299 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR4K5Q8NGD3 323 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR5L2Q8NGL0 311 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR4C3Q8NH37 302 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 OR8K3Q8NH51 312 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PHOSPHO1Q8TCT1 267 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 CT55Q8WUE5 264 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ACOT11Q8WXI4 607 aaPredicted RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GTPBP3Q969Y2 492 aaKnown RBP7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SLC41A3Q96GZ6 507 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MUS81Q96NY9 551 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 APOL4Q9BPW4 351 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 NIPSNAP1Q9BPW8 284 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GABARAPL3Q9BY60 117 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SPRY4Q9C004 299 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TRIM2Q9C040 744 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ZNF700Q9H0M5 742 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 ING2Q9H160 280 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 TMEM27Q9HBJ8 222 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 FLRT3Q9NZU0 649 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 SCOCQ9UIL1 159 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 MYRFQ9Y2G1 1151 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PCDHGB5Q9Y5G0 923 aa7.03□□□□□ -1.28
SCARNA20.1-201ENST00000516009 PTPRBP23467 1997 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF292O60281 2723 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 A0A087WUU8 490 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 IGHV1-45A0A0A0MS14 117 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 OR6C70A6NIJ9 312 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 EIF4E1BA6NMX2 242 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GTPBP1O00178 669 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 BCAS1O75363 584 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PPM1BO75688 479 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TNFSF15O95150 251 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NGFRP08138 427 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 UBL4AP11441 157 aa7.02□□□□□ -1.29
SCARNA20.1-201ENST00000516009 COX6A1P12074 109 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms