RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KCNE3Q9Y6H6 103 aa11.57□□□□□ -0.56
CLCN3-210ENST00000515420 ITPR2Q14571 2701 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 H3BNH8 94 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 DVL2O14641 736 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 POLR3GO15318 223 aaPredicted RBP11.56□□□□□ -0.56
CLCN3-210ENST00000515420 HCRTR2O43614 444 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 DIAPH2O60879 1101 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 STX11O75558 287 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 SASH3O75995 380 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 CPSF4O95639 269 aaKnown RBP11.56□□□□□ -0.56
CLCN3-210ENST00000515420 IL18BPO95998 194 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 KHKP50053 298 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 ANXA11P50995 505 aaKnown RBP11.56□□□□□ -0.56
CLCN3-210ENST00000515420 SUMO3P55854 103 aaPredicted RBP11.56□□□□□ -0.56
CLCN3-210ENST00000515420 EEFSECP57772 596 aaKnown RBP11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TMEM44Q2T9K0 475 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 ARHGAP11BQ3KRB8 267 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 FLYWCH1Q4VC44 716 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 KLHL26Q53HC5 615 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 ATAD3BQ5T9A4 648 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TNIP2Q8NFZ5 429 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 OR5D16Q8NGK9 328 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 CKAP2Q8WWK9 683 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 WNT2BQ93097 391 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 ZBTB8AQ96BR9 441 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 MAGEB18Q96M61 343 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 OR52B2Q96RD2 323 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 PANX1Q96RD7 426 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TRIB1Q96RU8 372 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TM9SF2Q99805 663 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TUBA1CQ9BQE3 449 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 SLC35A5Q9BS91 424 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 CCDC28BQ9BUN5 200 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF350Q9GZX5 532 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 OR51I1Q9H343 314 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 SLCO1B3Q9NPD5 702 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TCF7L2Q9NQB0 619 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 TMEM45AQ9NWC5 275 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 CLCF1Q9UBD9 225 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 RPH3AQ9Y2J0 694 aaPredicted RBP11.56□□□□□ -0.56
CLCN3-210ENST00000515420 AP4B1Q9Y6B7 739 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 MED12LQ86YW9 2145 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 KIAA1549Q9HCM3 1950 aa11.56□□□□□ -0.56
CLCN3-210ENST00000515420 OR2M5A3KFT3 312 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 CCDC154A6NI56 674 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 FAM90A27PA6NNH2 459 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 C19orf84I3L1E1 186 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 ZCCHC18P0CG32 403 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 POU3F2P20265 443 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-210ENST00000515420 CHI3L1P36222 383 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-210ENST00000515420 PEX19P40855 299 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 STARP49675 285 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF41P51814 821 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-210ENST00000515420 DGKQP52824 942 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 NME5P56597 212 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 RPS26P62854 115 aaKnown RBP11.55□□□□□ -0.56
CLCN3-210ENST00000515420 EEF1A1P68104 462 aaKnown RBP11.55□□□□□ -0.56
CLCN3-210ENST00000515420 CD226Q15762 336 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF141Q15928 474 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 EEF1A1P5Q5VTE0 462 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 C16orf62Q7Z3J2 963 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 MIER2Q8N344 545 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 GTPBP8Q8N3Z3 284 aaPredicted RBP11.55□□□□□ -0.56
CLCN3-210ENST00000515420 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 NAXEQ8NCW5 288 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 TOR1AIP2Q8NFQ8 470 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 B4GALNT2Q8NHY0 566 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 LRRC46Q96FV0 321 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 SAP130Q9H0E3 1048 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 RMND5AQ9H871 391 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 DTNAQ9Y4J8 743 aa11.55□□□□□ -0.56
CLCN3-210ENST00000515420 NOTCH2Q04721 2471 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 FAM234BA2RU67 622 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 NKX2-6A6NCS4 301 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 CLCA1A8K7I4 914 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 RFXANKO14593 260 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 KIAA0513O60268 411 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 EIF4E2O60573 245 aaKnown RBP11.54□□□□□ -0.56
CLCN3-210ENST00000515420 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 RCBTB2O95199 551 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 CRHP06850 196 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 CTSSP25774 331 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ELK4P28324 431 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ADH6P28332 368 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 OPRM1P35372 400 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 EIF1P41567 113 aaKnown RBP11.54□□□□□ -0.56
CLCN3-210ENST00000515420 P2RX1P51575 399 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 POLR2JP52435 117 aaKnown RBP11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF136P52737 540 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 STX1BP61266 288 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ZNF117Q03924 483 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 SRYQ05066 204 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 PLPPR5Q32ZL2 321 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 FBXL19-AS1Q494R0 122 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.54□□□□□ -0.56
CLCN3-210ENST00000515420 POMZP3Q6PJE2 187 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 CHMP1BQ7LBR1 199 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 GDF7Q7Z4P5 450 aa11.54□□□□□ -0.56
CLCN3-210ENST00000515420 CLEC4FQ8N1N0 589 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms