RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RFX3P48380 749 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 KCNJ5P48544 419 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 SELENOWP63302 87 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 EEF1A1P68104 462 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 KCNJ10P78508 379 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 ARG2P78540 354 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 OC90Q02509 493 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 DMTNQ08495 405 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 C17orf67Q0P5P2 114 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 RAPSNQ13702 412 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 EIPR1Q53HC9 387 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 ZNF311Q5JNZ3 666 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 PDZK1Q5T2W1 519 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 DESI1Q6ICB0 168 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 APOOLQ6UXV4 268 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 EIF3MQ7L2H7 374 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 OLIG3Q7RTU3 272 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 MDGA2Q7Z553 956 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 GALNT10Q86SR1 603 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 AQP12AQ8IXF9 295 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 ZADH2Q8N4Q0 377 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 TOR1AIP2Q8NFQ8 470 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 FIG4Q92562 907 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 ABHD17AQ96GS6 310 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 TMEM41AQ96HV5 264 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 OSBPL11Q9BXB4 747 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 RSPO3Q9BXY4 272 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 TBL1XR1Q9BZK7 514 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 PCDHAC1Q9H158 963 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 CACYBPQ9HB71 228 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 ADPRHL2Q9NX46 363 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 FLRT3Q9NZU0 649 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 SEC14L3Q9UDX4 400 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 RPS6KA6Q9UK32 745 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 BAG5Q9UL15 447 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 SAMD4AQ9UPU9 718 aaKnown RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 ZNF443Q9Y2A4 671 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 KLF13Q9Y2Y9 288 aaPredicted RBP10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 WIF1Q9Y5W5 379 aa10.96□□□□□ -0.65
PDLIM5-220ENST00000514830 PIEZO2Q9H5I5 2752 aa10.96□□□□□ -0.66
PDLIM5-220ENST00000514830 TLN1Q9Y490 2541 aaKnown RBP10.96□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF462Q96JM2 2506 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 NAV2Q8IVL1 2488 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 TRAV17A0A0B4J275 112 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 CENPVL1A0A0U1RR11 272 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 DPM1O60762 260 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 TRIM3O75382 744 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 SORBS2O94875 1100 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 STAMBPO95630 424 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 ANGPTL1O95841 491 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 P04436 131 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 NQO1P15559 274 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 IL7RP16871 459 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 MSX1P28360 303 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 AQP1P29972 269 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 MSX2P35548 267 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 SUMO3P55854 103 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 KCNJ2P63252 427 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 PLAURQ03405 335 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 HYAL4Q2M3T9 481 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 CYBRD1Q53TN4 286 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 SLC25A25Q6KCM7 469 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 RPUSD3Q6P087 351 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF836Q6ZNA1 936 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 Q6ZS92 163 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF440Q8IYI8 595 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF843Q8N446 348 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 LZICQ8WZA0 190 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 FAM162AQ96A26 154 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 CCDC124Q96CT7 223 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 CRELD1Q96HD1 420 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 NSMCE2Q96MF7 247 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 C5orf34Q96MH7 638 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 FAM173AQ9BQD7 235 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 DOHHQ9BU89 302 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 TRIM15Q9C019 465 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 LAT2Q9GZY6 243 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 QRSL1Q9H0R6 528 aaKnown RBP10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 METTL7AQ9H8H3 244 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 ANKRD10Q9NXR5 420 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 PLA2G3Q9NZ20 509 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 CHST2Q9Y4C5 530 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 PCNX3Q9H6A9 2034 aa10.95□□□□□ -0.66
PDLIM5-220ENST00000514830 SPTA1P02549 2419 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 NPIPA5A0A0B4J1W7 369 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 TCRBV5S2A0A599 114 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 NPIPA7E9PJI5 369 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 KLRC4-KLRK1H3BQV0 150 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 FAAHO00519 579 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 ZNF264O43296 627 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 SUV39H1O43463 412 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 NDUFB5O43674 189 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 EPPINO95925 133 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 LGI1O95970 557 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 SERPINA1P01009 418 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 PDGFAP04085 211 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 NPIPA8P0DM63 369 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 UMPSP11172 480 aa10.94□□□□□ -0.66
PDLIM5-220ENST00000514830 UBL4AP11441 157 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms