RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 GMPPAQ96IJ6 420 aaPredicted RBP10.93□□□□□ -0.66
SNHG4-208ENST00000514110 COX4I2Q96KJ9 171 aa10.93□□□□□ -0.66
SNHG4-208ENST00000514110 MS4A4EQ96PG1 132 aa10.93□□□□□ -0.66
SNHG4-208ENST00000514110 TMEM185BQ9H7F4 350 aa10.93□□□□□ -0.66
SNHG4-208ENST00000514110 SIRT3Q9NTG7 399 aaPredicted RBP10.93□□□□□ -0.66
SNHG4-208ENST00000514110 ACSS1Q9NUB1 689 aaPredicted RBP10.93□□□□□ -0.66
SNHG4-208ENST00000514110 STOML1Q9UBI4 398 aa10.93□□□□□ -0.66
SNHG4-208ENST00000514110 DNAJC15Q9Y5T4 150 aa10.93□□□□□ -0.66
SNHG4-208ENST00000514110 C7orf72A4D263 438 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 ADAMDEC1O15204 470 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 PLGP00747 810 aaPredicted RBP10.92□□□□□ -0.66
SNHG4-208ENST00000514110 NEFHP12036 1026 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 IL11P20809 199 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 PRIM2P49643 509 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 CTBP2P56545 445 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 RAC1P63000 192 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 CD226Q15762 336 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 UGT3A2Q3SY77 523 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 GALNTL6Q49A17 601 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 PRSS57Q6UWY2 283 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 C20orf204Q6ZNR8 217 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 YTHDF3Q7Z739 585 aaKnown RBP10.92□□□□□ -0.66
SNHG4-208ENST00000514110 COX18Q8N8Q8 333 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 OR2V1Q8NHB1 315 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 ACTRT2Q8TDY3 377 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 ZBTB8AQ96BR9 441 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 FAM120BQ96EK7 910 aaKnown RBP10.92□□□□□ -0.66
SNHG4-208ENST00000514110 UBQLN4Q9NRR5 601 aa10.92□□□□□ -0.66
SNHG4-208ENST00000514110 MCTS1Q9ULC4 181 aaKnown RBP10.92□□□□□ -0.66
SNHG4-208ENST00000514110 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
SNHG4-208ENST00000514110 UQCRHLA0A096LP55 91 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 TRIM64A6NGJ6 449 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 TRIM64BA6NI03 449 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 SMAD7O15105 426 aaKnown RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 OIP5O43482 229 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 TRIM13O60858 407 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 SYNGR4O95473 234 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 PLAUP00749 431 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 CHRNGP07510 517 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 ALOX5P09917 674 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 BCKDHAP12694 445 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 SHC1P29353 583 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 ASMTP46597 345 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 SERPINB4P48594 390 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 RNF144AP50876 292 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 ZNF41P51814 821 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 BEX5Q5H9J7 111 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 HBMQ6B0K9 141 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 ZCCHC12Q6PEW1 402 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 ESPNLQ6ZVH7 1005 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 DDIASQ8IXT1 998 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 OR7A2PQ8NGA2 310 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 TWIST2Q8WVJ9 160 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 IGFBPL1Q8WX77 278 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 JADE3Q92613 823 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 CDS1Q92903 461 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 TRMOQ9BU70 441 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 BTBD2Q9BX70 525 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 IQCGQ9H095 443 aaKnown RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 C12orf49Q9H741 205 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 PPCSQ9HAB8 311 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 HHATLQ9HCP6 504 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 PAQR5Q9NXK6 330 aaPredicted RBP10.91□□□□□ -0.66
SNHG4-208ENST00000514110 GIMAP2Q9UG22 337 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 TMED5Q9Y3A6 229 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 HEATR5AQ86XA9 2040 aa10.91□□□□□ -0.66
SNHG4-208ENST00000514110 NPIPA5A0A0B4J1W7 369 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 A0A1W2PQD3 144 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 NPIPA7E9PJI5 369 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 SCDO00767 359 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 PIP5K1BO14986 540 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 SCAMP2O15127 329 aaKnown RBP10.9□□□□□ -0.66
SNHG4-208ENST00000514110 EFNA2O43921 213 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 CHEK2O96017 543 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 HMGN2P05204 90 aaKnown RBP10.9□□□□□ -0.66
SNHG4-208ENST00000514110 FGF4P08620 206 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 NPIPA8P0DM63 369 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 NID1P14543 1247 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 HPGDP15428 266 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 PPP3CBP16298 524 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 ME2P23368 584 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 AGTR1P30556 359 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 ALDH3A1P30838 453 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 LCN1P31025 176 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 SFTPDP35247 375 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 ZNF117Q03924 483 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 LASP1Q14847 261 aaKnown RBP10.9□□□□□ -0.66
SNHG4-208ENST00000514110 MLC1Q15049 377 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 ZNF704Q6ZNC4 412 aaPredicted RBP10.9□□□□□ -0.66
SNHG4-208ENST00000514110 BEND4Q6ZU67 534 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 PLEKHM3Q6ZWE6 761 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 R3HCC1LQ7Z5L2 792 aaKnown RBP10.9□□□□□ -0.66
SNHG4-208ENST00000514110 TRABD2AQ86V40 505 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 WFDC8Q8IUA0 241 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 MISPQ8IVT2 679 aa10.9□□□□□ -0.66
SNHG4-208ENST00000514110 LILRA2Q8N149 483 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms