RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 STSP08842 583 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 CCNA2P20248 432 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 STAT5AP42229 794 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 PCYT1AP49585 367 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 ATP12AP54707 1039 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 SLC37A1P57057 533 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 EFNB1P98172 346 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 ST3GAL4Q11206 333 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 IRF3Q14653 427 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 ARHGAP40Q5TG30 622 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 ZNF613Q6PF04 617 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 MEX3DQ86XN8 651 aaKnown RBP13.81□□□□□ -0.2
VCAN-211ENST00000513984 TMEM151BQ8IW70 566 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 CMIPQ8IY22 773 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 RNF113BQ8IZP6 322 aaKnown RBP13.81□□□□□ -0.2
VCAN-211ENST00000513984 STX19Q8N4C7 294 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 FAM26EQ8N5C1 309 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 BCORP1Q8N888 145 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 ZSCAN1Q8NBB4 408 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 OR4D9Q8NGE8 314 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 CNOT9Q92600 299 aaKnown RBP13.81□□□□□ -0.2
VCAN-211ENST00000513984 FGF11Q92914 225 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 NAT6Q93015 286 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 YIPF6Q96EC8 236 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 DSN1Q9H410 356 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 EGLN3Q9H6Z9 239 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 PNO1Q9NRX1 252 aaKnown RBP13.81□□□□□ -0.2
VCAN-211ENST00000513984 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.81□□□□□ -0.2
VCAN-211ENST00000513984 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
VCAN-211ENST00000513984 DYRK3O43781 588 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 PIP5K1CO60331 668 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 MAN1A2O60476 641 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 IGKV3-11P04433 115 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 LCKP06239 509 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 PSMB9P28065 219 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ST13P50502 369 aaKnown RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 RNF144AP50876 292 aaPredicted RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 EFNA3P52797 238 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 CCL7P80098 99 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ACY1Q03154 408 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ELAVL1Q15717 326 aaKnown RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 NNATQ16517 81 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 MINDY4Q4G0A6 757 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 MFSD4BQ5TF39 518 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ACSM5Q6NUN0 579 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 SLC27A4Q6P1M0 643 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 WDR88Q6ZMY6 472 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 RABEPKQ7Z6M1 372 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 CLDN22Q8N7P3 220 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ZNF614Q8N883 585 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 TCEANCQ8N8B7 351 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 OR8D4Q8NGM9 314 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 SLC46A1Q96NT5 459 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 DPYSL5Q9BPU6 564 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 MKKSQ9NPJ1 570 aaPredicted RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 IL20Q9NYY1 176 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 TVP23BQ9NYZ1 205 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ZNF223Q9UK11 482 aaPredicted RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 OR10H1Q9Y4A9 318 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 VCANP13611 3396 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 A0A1W2PPW3 197 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 PRKYO43930 277 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 GABARAPO95166 117 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 DDAH2O95865 285 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 RPLP0P05388 317 aaKnown RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 GPR4P46093 362 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 NFATC3Q12968 1075 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 MEDAGQ5VYS4 303 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 RHBDD2Q6NTF9 364 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 ZNF620Q6ZNG0 422 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 C9orf43Q8TAL5 461 aaPredicted RBP13.8□□□□□ -0.2
VCAN-211ENST00000513984 CEP76Q8TAP6 659 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 DCUN1D5Q9BTE7 237 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 CDCA4Q9BXL8 241 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 LRRN3Q9H3W5 708 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 TMEM27Q9HBJ8 222 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 DNAJC27Q9NZQ0 273 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 CFL2Q9Y281 166 aa13.8□□□□□ -0.2
VCAN-211ENST00000513984 A0A0B4J2E0 115 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 A0A1B0GX12 115 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 POLR1CO15160 346 aaPredicted RBP13.79□□□□□ -0.2
VCAN-211ENST00000513984 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 ACAA2P42765 397 aaKnown RBP13.79□□□□□ -0.2
VCAN-211ENST00000513984 PPICP45877 212 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 CTF1Q16619 201 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 VWA2Q5GFL6 755 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 C1orf189Q5VU69 101 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 COX15Q7KZN9 410 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 EID2Q8N6I1 236 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 ZNF321PQ8N8H1 164 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 ZNF721Q8TF20 911 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 TMEM239Q8WW34 195 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 OSTF1Q92882 214 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 TIMMDC1Q9NPL8 285 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 FBXO4Q9UKT5 387 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 CLCA3PQ9Y6N3 262 aa13.79□□□□□ -0.2
VCAN-211ENST00000513984 CDH10Q9Y6N8 788 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms