RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CCKBRP32239 447 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PER3P56645 1201 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 MBTPS1Q14703 1052 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PCGF3Q3KNV8 242 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PUS10Q3MIT2 529 aaKnown RBP10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM164Q5U3C3 297 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GRHL2Q6ISB3 625 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PRSS42Q7Z5A4 293 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 WDSUB1Q8N9V3 476 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 FAM83CQ9BQN1 747 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GABARAPL3Q9BY60 117 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 PLAGL1Q9UM63 463 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 GVINP1Q7Z2Y8 2422 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 THSD7AQ9UPZ6 1657 aa10.6□□□□□ -0.71
TCOF1-211ENST00000513346 A0A1B0GVT2 93 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 IFNA17P01571 189 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 NAA10P41227 235 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ACTBP60709 375 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ACTG1P63261 375 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 MAP4K2Q12851 820 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 TEX261Q6UWH6 196 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SLC9B2Q86UD5 537 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF546Q86UE3 836 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF584Q8IVC4 421 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SLC39A11Q8N1S5 342 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 TRAM1L1Q8N609 369 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 MDGA1Q8NFP4 955 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 OR51A7Q8NH64 312 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ST6GAL2Q96JF0 529 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ATG5Q9H1Y0 275 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 BRF2Q9HAW0 419 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ACOXLQ9NUZ1 547 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ABI3Q9P2A4 366 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 U3KQ87 197 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 C2orf74A8MZ97 194 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 EEF1E1-BLOC1S5C9J1V9 151 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 C9J4A7 227 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 GATBO75879 557 aaKnown RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 DLSTP36957 453 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 KIR2DL3P43628 341 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 PHF19Q5T6S3 580 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 KANSL1Q7Z3B3 1105 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 KCTD20Q7Z5Y7 419 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 NANOGP1Q8N7R0 232 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 OR2L5Q8NG80 312 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 OR56A3Q8NH54 315 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 MFSD8Q8NHS3 518 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SMAP2Q8WU79 429 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 TREX2Q9BQ50 279 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 DDX31Q9H8H2 851 aaKnown RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 PNO1Q9NRX1 252 aaKnown RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 CYP8B1Q9UNU6 501 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 CSNK1G3Q9Y6M4 447 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 PAPPAQ13219 1627 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 A0A1W2PQU0 124 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 PCMT1P22061 227 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 CLCN7P51798 805 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 DEFB103AP81534 67 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 DEFA6Q01524 100 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 HTR4Q13639 388 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ZMAT1Q5H9K5 638 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 LRIF1Q5T3J3 769 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 LRRC56Q8IYG6 542 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 PXT1Q8NFP0 134 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 OR8J2Q8NGG1 315 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ST8SIA2Q92186 375 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 NSMAFQ92636 917 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 OR2M4Q96R27 311 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 MRI1Q9BV20 369 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 POLDIP3Q9BY77 421 aaKnown RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 NCDNQ9UBB6 729 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SUSD2Q9UGT4 822 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 GXYLT2A0PJZ3 443 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 H3BQ06 376 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 CDC40O60508 579 aaKnown RBP eCLIP10.59□□□□□ -0.719e-7■■■□□ 18.5
TCOF1-211ENST00000513346 UBL3O95164 117 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 CD70P32970 193 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SNRPGP62308 76 aaKnown RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SEMA3BQ13214 749 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ODF4Q2M2E3 257 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 AVPI1Q5T686 147 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 KIAA0319Q5VV43 1072 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ALKAL1Q6UXT8 129 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 APOOLQ6UXV4 268 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF551Q7Z340 670 aaPredicted RBP10.59□□□□□ -0.71
TCOF1-211ENST00000513346 SIAH3Q8IW03 269 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 FIBINQ8TAL6 211 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 THEM6Q8WUY1 208 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 LRRC46Q96FV0 321 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 PITX2Q99697 317 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 C12orf10Q9HB07 376 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 CNIH4Q9P003 139 aa10.59□□□□□ -0.71
TCOF1-211ENST00000513346 TCRBV21S2A2A0A5A6 115 aa10.58□□□□□ -0.72
TCOF1-211ENST00000513346 DBIP07108 87 aaKnown RBP10.58□□□□□ -0.72
TCOF1-211ENST00000513346 C8orf89P0DMQ9 161 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms