RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TMEM41AQ96HV5 264 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF597Q96LX8 424 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 FRMD6Q96NE9 622 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 TREX2Q9BQ50 279 aaPredicted RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 DOHHQ9BU89 302 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ANGPTL4Q9BY76 406 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 CACYBPQ9HB71 228 aaKnown RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 BCL2L10Q9HD36 194 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 SDHAF3Q9NRP4 125 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 DEPPQ9NTK1 212 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 FLRT3Q9NZU0 649 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 TMEM181Q9P2C4 612 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 MKLN1Q9UL63 735 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 BOKQ9UMX3 212 aaPredicted RBP6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 MED12LQ86YW9 2145 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 DOCK7Q96N67 2140 aa6.94□□□□□ -1.3
HMGXB3-204ENST00000513318 IGSF10Q6WRI0 2623 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 NPIPA5A0A0B4J1W7 369 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ELOVL7A1L3X0 281 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 AGAP5A6NIR3 686 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 NPIPA7E9PJI5 369 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 G3V3Y1 287 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 H3BNH8 94 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ACOT7O00154 380 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 NDUFB5O43674 189 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SCO2O43819 266 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PEX1O43933 1283 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 TRIM3O75382 744 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ATP5HO75947 161 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SORBS2O94875 1100 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 RASAL1O95294 804 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PGM3O95394 542 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ANGPTL1O95841 491 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 DBIP07108 87 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 THBS1P07996 1170 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 NPIPA8P0DM63 369 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 HSD17B1P14061 328 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 NID1P14543 1247 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 IL7RP16871 459 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ENDOUP21128 410 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ADH7P40394 386 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 MASP1P48740 699 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 GSK3BP49841 420 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 MEOX1P50221 254 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 GAS1P54826 345 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PCBP3P57721 371 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 CHRNEQ04844 493 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 LIPEQ05469 1076 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 C17orf67Q0P5P2 114 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 VEZF1Q14119 521 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 FGFBP1Q14512 234 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PLEKHN1Q494U1 663 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 DNAL1Q4LDG9 190 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 LIN52Q52LA3 116 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 KLHL26Q53HC5 615 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 RPS26P11Q5JNZ5 115 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SAMD4BQ5PRF9 694 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PDZK1Q5T2W1 519 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 FNDC7Q5VTL7 733 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 FAM180AQ6UWF9 173 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 APOOLQ6UXV4 268 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 RINLQ6ZS11 566 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 CCDC121Q6ZUS5 278 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 OLIG3Q7RTU3 272 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PATL1Q86TB9 770 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 IFNEQ86WN2 208 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 KRT73Q86Y46 540 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SULF2Q8IWU5 870 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PEX5LQ8IYB4 626 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 MICU2Q8IYU8 434 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 Q8NA96 180 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ZFP62Q8NB50 900 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 TNIP2Q8NFZ5 429 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 WDR60Q8WVS4 1066 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 NTNG2Q96CW9 530 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF583Q96ND8 569 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ZNF607Q96SK3 696 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 KCTD14Q9BQ13 255 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SPATA5L1Q9BVQ7 753 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 QRSL1Q9H0R6 528 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PIF1Q9H611 641 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 MTHFD2LQ9H903 347 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PROK2Q9HC23 129 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 GALNT9Q9HCQ5 603 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 TAS2R1Q9NYW7 299 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ADA2Q9NZK5 511 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PPP4R1LQ9P1A2 415 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 B4GALT7Q9UBV7 327 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 KCNE5Q9UJ90 142 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ANAPC2Q9UJX6 822 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 PRPF19Q9UMS4 504 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SLC35A3Q9Y2D2 325 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 DTNAQ9Y4J8 743 aa6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 GPC6Q9Y625 555 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 RP1L1Q8IWN7 2480 aaPredicted RBP6.93□□□□□ -1.3
HMGXB3-204ENST00000513318 ZFYVE26Q68DK2 2539 aa6.92□□□□□ -1.3
HMGXB3-204ENST00000513318 IGLV3-32A0A0A0MS00 114 aa6.92□□□□□ -1.3
HMGXB3-204ENST00000513318 A0A0G2JMM0 328 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms