RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KIF2BQ8N4N8 673 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ITFG1Q8TB96 612 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 FAM222BQ8WU58 562 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 RPL3LQ92901 407 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLCO4A1Q96BD0 722 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 AKR1E2Q96JD6 320 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF512Q96ME7 567 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF251Q9BRH9 671 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 IFT27Q9BW83 186 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLITRK2Q9H156 845 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 C1orf198Q9H425 327 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 TRABDQ9H4I3 376 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ACTL8Q9H568 366 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 MTHFD2LQ9H903 347 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SIAEQ9HAT2 523 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 GPAMQ9HCL2 828 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 SIX2Q9NPC8 291 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 NLGN3Q9NZ94 848 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CRIM1Q9NZV1 1036 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 DNMT3BQ9UBC3 853 aaKnown RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF639Q9UID6 485 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CLEC4EQ9ULY5 219 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 FOXJ3Q9UPW0 622 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CA5BQ9Y2D0 317 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR10H1Q9Y4A9 318 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASB4Q9Y574 426 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 KLF2Q9Y5W3 355 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 CAPN6Q9Y6Q1 641 aa4.67□□□□□ -1.66
TRAPPC11-208ENST00000511955 FRYLO94915 3013 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TCF20Q9UGU0 1960 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 A0A1W2PPQ1 181 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF487B1APH4 448 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 H3BN98 237 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MKRN2OSH3BPM6 223 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PPP6CO00743 305 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 FLRT2O43155 660 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MBTPS2O43462 519 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 RGS10O43665 173 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LCMT2O60294 686 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC25A12O75746 678 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ESRRBO95718 433 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ADAP00813 363 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 FUCA1P04066 466 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CRYGBP07316 175 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 RNH1P13489 461 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 UCHL3P15374 230 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ELAVL4P26378 380 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PSMB5P28074 263 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 HTR2AP28223 471 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 HOXD9P28356 352 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 GABRR2P28476 465 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 GTF2E2P29084 291 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 NUDT1P36639 197 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CFHR2P36980 270 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CCR2P41597 374 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MAGEA6P43360 314 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 LIMS1P48059 325 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 RGS6P49758 472 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ERVS71-1P61550 626 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MRPS22P82650 360 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 BNIP3Q12983 259 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 IL18R1Q13478 541 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MTF1Q14872 753 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TAF13Q15543 124 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 MICBQ29980 383 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 EIF2S3LQ2VIR3 472 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TMEM249Q2WGJ8 235 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CCNJQ5T5M9 372 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 DDI2Q5TDH0 399 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR52W1Q6IF63 320 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF562Q6V9R5 426 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CERS6Q6ZMG9 384 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 Q6ZPB1 254 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC16A12Q6ZSM3 486 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 DET1Q7L5Y6 550 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 APTXQ7Z2E3 356 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SETD3Q86TU7 594 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC47A2Q86VL8 602 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 DHFR2Q86XF0 187 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 GLB1L2Q8IW92 636 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZNF100Q8IYN0 542 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 GABRG1Q8N1C3 465 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 METTL4Q8N3J2 472 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 OR6X1Q8NH79 312 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SPPL2BQ8TCT7 592 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 PIH1D2Q8WWB5 315 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 TFAP2BQ92481 460 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 NDRG1Q92597 394 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 CPNE4Q96A23 557 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ARSGQ96EG1 525 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 BIRC8Q96P09 236 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 EBNA1BP2Q99848 306 aaKnown RBP4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 SLC46A2Q9BY10 475 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ATXN3LQ9H3M9 355 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 FN3KQ9H479 309 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ELOVL3Q9HB03 270 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ASAH2Q9NR71 780 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 NUDT5Q9UKK9 219 aa4.66□□□□□ -1.66
TRAPPC11-208ENST00000511955 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms