RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 FAHD1Q6P587 224 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 TSEN54Q7Z6J9 526 aaKnown RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 RANBP3LQ86VV4 465 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 CARM1Q86X55 608 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 OFCC1Q8IZS5 231 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SLC15A4Q8N697 577 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SMYD1Q8NB12 490 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 GALNT11Q8NCW6 608 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 OR4C15Q8NGM1 316 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 PHF10Q8WUB8 498 aaKnown RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ADIPOR1Q96A54 375 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 RMND5BQ96G75 393 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ABHD17AQ96GS6 310 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ITPAQ9BY32 194 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ANKRD60Q9BZ19 345 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 AMBRA1Q9C0C7 1298 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 OR8D2Q9GZM6 311 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 WWTR1Q9GZV5 400 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ZNF700Q9H0M5 742 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ANKRA2Q9H9E1 313 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 EXOSC3Q9NQT5 275 aaKnown RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SLC35A3Q9Y2D2 325 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SH3GLB1Q9Y371 365 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SAMHD1Q9Y3Z3 626 aaKnown RBP8.4□□□□□ -1.06
NR1I3-228ENST00000511676 OR10H1Q9Y4A9 318 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 PCDHGA6Q9Y5G7 932 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 ORC6Q9Y5N6 252 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 PIEZO2Q9H5I5 2752 aa8.4□□□□□ -1.06
NR1I3-228ENST00000511676 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 C2orf92A0A1B0GVN3 265 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 HTR3EA5X5Y0 456 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 PRAMEF25A6NGN4 478 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 SAC3D1A6NKF1 404 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 TTLL8A6PVC2 850 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 hCG_2039718K7EN88 272 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 TNFRSF11BO00300 401 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 CDK2AP1O14519 115 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 UGT2B17O75795 530 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 KLF7O75840 302 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 OR5F1O95221 314 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 GADD45GO95257 159 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 MT-ND1P03886 318 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 MMP11P24347 488 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 RRM2P31350 389 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 KRT20P35900 424 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 ETV5P41161 510 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 FOLR3P41439 243 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 STAT5AP42229 794 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 CD97P48960 835 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 TMED10P49755 219 aaKnown RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 EFNA3P52797 238 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 PNLIPRP2P54317 469 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 NRG3P56975 720 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 IL18R1Q13478 541 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 MED21Q13503 144 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 EFR3AQ14156 821 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 FGFBP1Q14512 234 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 DEFB109BQ30KR1 87 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 TTC23Q5W5X9 447 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 KDM4DQ6B0I6 523 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 PAPD4Q6PIY7 484 aaKnown RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 ASB18Q6ZVZ8 466 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 STK32CQ86UX6 486 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 LAPTM4BQ86VI4 370 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 APLFQ8IW19 511 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 C9orf40Q8IXQ3 194 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 DND1Q8IYX4 353 aaKnown RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 SLC34A3Q8N130 599 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 ARMC10Q8N2F6 343 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 PARP8Q8N3A8 854 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 MARVELD2Q8N4S9 558 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 BCORP1Q8N888 145 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 SIMC1Q8NDZ2 872 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 M1APQ8TC57 530 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 TM9SF4Q92544 642 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 TFAP2CQ92754 450 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 DIO2Q92813 273 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 MR1Q95460 341 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 SLC29A1Q99808 456 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 FUZQ9BT04 418 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 NUDT9Q9BW91 350 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 UBQLN4Q9NRR5 601 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 MKLN1Q9UL63 735 aa8.39□□□□□ -1.07
NR1I3-228ENST00000511676 PCDHGA9Q9Y5G4 932 aaKnown RBP8.39□□□□□ -1.07
NR1I3-228ENST00000511676 NUP214P35658 2090 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-228ENST00000511676 OR6C70A6NIJ9 312 aa8.38□□□□□ -1.07
NR1I3-228ENST00000511676 H3BNH8 94 aa8.38□□□□□ -1.07
NR1I3-228ENST00000511676 HRKO00198 91 aa8.38□□□□□ -1.07
NR1I3-228ENST00000511676 FAAHO00519 579 aa8.38□□□□□ -1.07
NR1I3-228ENST00000511676 AP3D1O14617 1153 aa8.38□□□□□ -1.07
NR1I3-228ENST00000511676 HS6ST1O60243 411 aa8.38□□□□□ -1.07
NR1I3-228ENST00000511676 CNOT3O75175 753 aaKnown RBP8.38□□□□□ -1.07
NR1I3-228ENST00000511676 AGFG2O95081 481 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms