RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 BCAS1O75363 584 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 TRAPPC6AO75865 159 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 UBOX5O94941 541 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 UBL4AP11441 157 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ESRRAP11474 423 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 PCGF2P35227 344 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 TDGF1P3P51864 188 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 PSME3P61289 254 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 SLC25A3Q00325 362 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF117Q03924 483 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 GNA13Q14344 377 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ESPL1Q14674 2120 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF141Q15928 474 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF630Q2M218 657 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 KLHL26Q53HC5 615 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 CMPK2Q5EBM0 449 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 C8orf82Q6P1X6 216 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 HACD2Q6Y1H2 254 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 NET1Q7Z628 596 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ARPINQ7Z6K5 226 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 SERPINA11Q86U17 422 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 IFNEQ86WN2 208 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 VRK2Q86Y07 508 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 PLCZ1Q86YW0 608 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 PEX5LQ8IYB4 626 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 C11orf65Q8NCR3 313 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 OR2M3Q8NG83 312 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 OR52P1PQ8NH57 321 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 BBS10Q8TAM1 723 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 WDR60Q8WVS4 1066 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 NTNG2Q96CW9 530 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 NSL1Q96IY1 281 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 SLX1AQ9BQ83 275 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 KLHDC3Q9BQ90 382 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 GPATCH1Q9BRR8 931 aaKnown RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 SAP130Q9H0E3 1048 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 DSN1Q9H410 356 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 TMEM38AQ9H6F2 299 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 EXO5Q9H790 373 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 CACYBPQ9HB71 228 aaKnown RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 PACSIN3Q9UKS6 424 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF443Q9Y2A4 671 aaPredicted RBP9.48□□□□□ -0.89
NR1I3-227ENST00000510951 CARD8Q9Y2G2 431 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 DSPPQ9NZW4 1301 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 KIAA1549Q9HCM3 1950 aa9.48□□□□□ -0.89
NR1I3-227ENST00000510951 SMG1Q96Q15 3661 aaKnown RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 CFAP46Q8IYW2 2715 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF462Q96JM2 2506 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 AGAP5A6NIR3 686 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 FAM220BPB1ANY3 271 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 NME4O00746 187 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 PGM3O95394 542 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 NUDT14O95848 222 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 CSTAP01040 98 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 OPN1SWP03999 348 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 UBTFL6P0CB48 400 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 IL7RP16871 459 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 RPS4Y1P22090 263 aaKnown RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 GZMMP51124 257 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 C17orf67Q0P5P2 114 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 FGFBP1Q14512 234 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 IGFBP7Q16270 282 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 HYAL4Q2M3T9 481 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 EIPR1Q53HC9 387 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 WIPI1Q5MNZ9 446 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 MRPL2Q5T653 305 aaKnown RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 REEP3Q6NUK4 255 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 CBLN3Q6UW01 205 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 GFRALQ6UXV0 394 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 ZNF836Q6ZNA1 936 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 YRDCQ86U90 279 aaKnown RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 SLC15A3Q8IY34 581 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 FADS6Q8N9I5 356 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 HIPK4Q8NE63 616 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 FAM83FQ8NEG4 500 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 OR14L1PQ8NHC6 308 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 B4GALNT2Q8NHY0 566 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 MIB2Q96AX9 1013 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 GPR137Q96N19 417 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 UBQLN3Q9H347 655 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 LDAHQ9H6V9 325 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 ZDHHC11Q9H8X9 412 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 SPAG4Q9NPE6 437 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 ADA2Q9NZK5 511 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 SEC14L3Q9UDX4 400 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 VDAC3Q9Y277 283 aa9.47□□□□□ -0.89
NR1I3-227ENST00000510951 RPH3AQ9Y2J0 694 aaPredicted RBP9.47□□□□□ -0.89
NR1I3-227ENST00000510951 ARHGAP21Q5T5U3 1957 aa9.46□□□□□ -0.89
NR1I3-227ENST00000510951 A0A0G2JPF8 293 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 HNRNPCL2B2RXH8 293 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 HNRNPCL3B7ZW38 293 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 SHISA8B8ZZ34 492 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 ZNF264O43296 627 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 HNRNPCL1O60812 293 aaKnown RBP9.46□□□□□ -0.9
NR1I3-227ENST00000510951 CBR3O75828 277 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 DBIP07108 87 aaKnown RBP9.46□□□□□ -0.9
NR1I3-227ENST00000510951 GUSBP08236 651 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 PABPC4LP0CB38 370 aaKnown RBP9.46□□□□□ -0.9
NR1I3-227ENST00000510951 HNRNPCL4P0DMR1 293 aa9.46□□□□□ -0.9
NR1I3-227ENST00000510951 EDN3P14138 238 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms