RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NME5P56597 212 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 CLDN8P56748 225 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 PON3Q15166 354 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 SGCBQ16585 318 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 NDUFAF6Q330K2 333 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 VWA1Q6PCB0 445 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 OLIG3Q7RTU3 272 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 ANKRD46Q86W74 232 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 KIF18BQ86Y91 864 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 FNDC9Q8TBE3 224 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 PHOSPHO1Q8TCT1 267 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 SFXN5Q8TD22 340 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 PGM2Q96G03 612 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 OR7D2Q96RA2 312 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 UCN2Q96RP3 112 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 STACQ99469 402 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 DPY30Q9C005 99 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 CLEC4MQ9H2X3 399 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 LIME1Q9H400 295 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 NEUROD4Q9HD90 331 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 ASIC5Q9NY37 505 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 JKAMPQ9P055 326 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 FOXD3Q9UJU5 478 aaPredicted RBP13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 PACSIN3Q9UKS6 424 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 ACTL7BQ9Y614 415 aa13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 TEP1Q99973 2627 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-228ENST00000508974 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 RNF103-CHMP3A0A140T963 221 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 TMEM120BA0PK00 339 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 A6NNC1 897 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 OIP5O43482 229 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 TNFSF13O75888 250 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 CPSF4O95639 269 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 NUDT14O95848 222 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 NGFRP08138 427 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 EIF1AXP47813 144 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 EEFSECP57772 596 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF117Q03924 483 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 CROCCP2Q86T23 111 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 GGNQ86UU5 652 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 NATD1Q8N6N6 113 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 GOT1L1Q8NHS2 421 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 B4GALNT2Q8NHY0 566 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 RFWD2Q8NHY2 731 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 PSMA8Q8TAA3 256 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 FAM222BQ8WU58 562 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 SLC35G5Q96KT7 338 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 RNF145Q96MT1 663 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 OPN3Q9H1Y3 402 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 SERHL2Q9H4I8 314 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 MED17Q9NVC6 651 aa13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 MARCOQ9UEW3 520 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.33□□□□□ -0.28
UBE2D3-228ENST00000508974 GOLGA8QA0A0J9YX86 632 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 GOLGA8OA6NCC3 632 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 C9JVG2 144 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 GOLGA8NF8WBI6 632 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 LINC01387J3KSC0 135 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 TUBBP07437 444 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 KRT16P08779 473 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 KITP10721 976 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 LBPP18428 481 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 PEX19P40855 299 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 WDR4P57081 412 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 RPS3AP61247 264 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 LSM11P83369 360 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 POU4F3Q15319 338 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 TMEM44Q2T9K0 475 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 SMU1Q2TAY7 513 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 PLPPR5Q32ZL2 321 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 GLYR1Q49A26 553 aaPredicted RBP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 CBLN3Q6UW01 205 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 C6orf120Q7Z4R8 191 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 WDR75Q8IWA0 830 aaKnown RBP13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 TMCO5AQ8N6Q1 288 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF527Q8NB42 609 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 MOAP1Q96BY2 351 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 PRRG4Q9BZD6 226 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 PIGMQ9H3S5 423 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 RASSF1Q9NS23 344 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 CLEC4AQ9UMR7 237 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 CARD8Q9Y2G2 431 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 AP4B1Q9Y6B7 739 aa13.32□□□□□ -0.28
UBE2D3-228ENST00000508974 SPG11Q96JI7 2443 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 A0A087WZY1 265 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 UQCRHLA0A096LP55 91 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 A0A1W2PQD3 144 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 GTPBP1O00178 669 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 TNFSF11O14788 317 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 TNFRSF21O75509 655 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 AQP8O94778 261 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 ZNF17P17021 662 aa13.31□□□□□ -0.28
UBE2D3-228ENST00000508974 IL11P20809 199 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms