RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ST3GAL3Q11203 375 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 RIN1Q13671 783 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 RUNX2Q13950 521 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 DSG2Q14126 1118 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 DOC2BQ14184 412 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SUZ12Q15022 739 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 QPRTQ15274 297 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 DEFB110Q30KQ9 67 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 TBRG1Q3YBR2 411 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CRTC2Q53ET0 693 aaPredicted RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 TIGD3Q6B0B8 471 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 C22orf42Q6IC83 251 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 HMGN2P46Q86SG4 172 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ANKK1Q8NFD2 765 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 RERGQ96A58 199 aaPredicted RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 TRMT61AQ96FX7 289 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 HSPA12BQ96MM6 686 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF681Q96N22 645 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SAP130Q9H0E3 1048 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 MIXL1Q9H2W2 232 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 RNF121Q9H920 327 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 MAN2C1Q9NTJ4 1040 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 KLHL28Q9NXS3 571 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 KCMF1Q9P0J7 381 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 KLHL21Q9UJP4 597 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SF3B6Q9Y3B4 125 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 A0A1W2PR77 199 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 FAM221BA6H8Z2 402 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 A8MU76 341 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 M0R3H8 397 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 PLD2O14939 933 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 AKAP8O43823 692 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SSX4O60224 188 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SMIM10L1P0DMW3 83 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ST6GAL1P15907 406 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 CSNK2A2P19784 350 aaPredicted RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 MYL9P24844 172 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 MPIP34949 423 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SIM1P81133 766 aaPredicted RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 TNFRSF17Q02223 184 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SIGLEC14Q08ET2 396 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 PYDC2Q56P42 97 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 NXNL2Q5VZ03 156 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 PRICKLE2Q7Z3G6 844 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 OOSP2Q86WS3 158 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 LIX1LQ8IVB5 337 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 OR4N5Q8IXE1 308 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 C19orf18Q8NEA5 215 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 OR5T3Q8NGG3 340 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 OR6T1Q8NGN1 323 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 PIGXQ8TBF5 258 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ENKURQ8TC29 256 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SLC7A6Q92536 515 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 KAT2AQ92830 837 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 COL26A1Q96A83 441 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 C16orf58Q96GQ5 468 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 SMIM10Q96HG1 83 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 C10orf90Q96M02 699 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 NEDD4LQ96PU5 975 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ARHGDIGQ99819 225 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 WFDC6Q9BQY6 131 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 JAM3Q9BX67 310 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 FAM60AQ9NP50 221 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 KRCC1Q9NPI7 259 aaPredicted RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 EQTNQ9NQ60 294 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 GIMAP4Q9NUV9 329 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ASB6Q9NWX5 421 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 LYARQ9NX58 379 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 WNT16Q9UBV4 365 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 DAPP1Q9UN19 280 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 POLHQ9Y253 713 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 ZNF780BQ9Y6R6 833 aa10.26□□□□□ -0.77
SH3RF1-203ENST00000508685 NINQ8N4C6 2090 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 WWP2O00308 870 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 SCO2O43819 266 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 SDC3O75056 442 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 UBXN7O94888 489 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 HMGN1P05114 100 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 PRKAR1AP10644 381 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 NME1P15531 152 aaKnown RBP10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 BUD31P41223 144 aaPredicted RBP10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 VSX2P58304 361 aaPredicted RBP10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 TAS2R41P59536 307 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 MXD1Q05195 221 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 FUT5Q11128 374 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 CEBPEQ15744 281 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 TAB1Q15750 504 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 GPAT3Q53EU6 434 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 ZMAT1Q5H9K5 638 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 C1QTNF12Q5T7M4 302 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 THOC7Q6I9Y2 204 aaKnown RBP10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 PLET1Q6UQ28 207 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 RNF44Q7L0R7 432 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 ABHD13Q7L211 337 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 WDR53Q7Z5U6 358 aaPredicted RBP10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 GALNT12Q8IXK2 581 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 IQCF1Q8N6M8 205 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 POGLUT1Q8NBL1 392 aa10.25□□□□□ -0.77
SH3RF1-203ENST00000508685 CAMKVQ8NCB2 501 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms