RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 IL7RP16871 459 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ZNF17P17021 662 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 GPX2P18283 190 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 SLC6A2P23975 617 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 CHMP24386 653 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 PRDX6P30041 224 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ADH7P40394 386 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 EIF1P41567 113 aaKnown RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 CASP9P55211 416 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 RBBP4Q09028 425 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 MRPL49Q13405 166 aaKnown RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 ART3Q13508 389 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 LARS2Q15031 903 aaKnown RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 CYP51A1Q16850 503 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 GTDC1Q4AE62 458 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 C4orf17Q53FE4 359 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 NHSL2Q5HYW2 709 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 COX20Q5RI15 118 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 REP15Q6BDI9 236 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 DESI1Q6ICB0 168 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 TYW3Q6IPR3 259 aaKnown RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 DLEU7Q6UYE1 221 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 GALNT10Q86SR1 603 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ZNF440Q8IYI8 595 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 TMCO5AQ8N6Q1 288 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 C11orf65Q8NCR3 313 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 FAM83FQ8NEG4 500 aaPredicted RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 BHLHE22Q8NFJ8 381 aaPredicted RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 OR2M3Q8NG83 312 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 B4GALNT2Q8NHY0 566 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 BBS10Q8TAM1 723 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 FAM57AQ8TBR7 257 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 SLC38A5Q8WUX1 472 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ZBTB8AQ96BR9 441 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 AURKBQ96GD4 344 aaPredicted RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 SFXN2Q96NB2 322 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ANKRD27Q96NW4 1050 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 CCT8L2Q96SF2 557 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ZNF607Q96SK3 696 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 TREX2Q9BQ50 279 aaPredicted RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 THUMPD3Q9BV44 507 aaKnown RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 SPATA5L1Q9BVQ7 753 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 TP63Q9H3D4 680 aaPredicted RBP8.32□□□□□ -1.08
NUP54-207ENST00000508583 TMEM38AQ9H6F2 299 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 EFCAB1Q9HAE3 211 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 SLC6A13Q9NSD5 602 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 SLC25A37Q9NYZ2 338 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 FLRT3Q9NZU0 649 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 VAPAQ9P0L0 249 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ARMCX1Q9P291 453 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ADAM21Q9UKJ8 722 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 MKLN1Q9UL63 735 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 OSGIN2Q9Y236 505 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ANGPT4Q9Y264 503 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 SLC5A6Q9Y289 635 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 ZNF835Q9Y2P0 537 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 IFT52Q9Y366 437 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 KCNE3Q9Y6H6 103 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 GTF3C1Q12789 2109 aa8.32□□□□□ -1.08
NUP54-207ENST00000508583 FASNP49327 2511 aaKnown RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 TRGV8A0A0C4DH27 118 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 LOC100653049A0A140TA62 436 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 C7orf72A4D263 438 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 C2orf72A6NCS6 295 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 PRORSD1PA6NEY8 169 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 SERINC4A6NH21 518 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 AGAP5A6NIR3 686 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 GJE1A6NN92 205 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 UGT2B17O75795 530 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 KRT34O76011 436 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 NUDT14O95848 222 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 CSTAP01040 98 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 TPOP07202 933 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 THBS1P07996 1170 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 RFPL3SP0C7P2 107 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 NID1P14543 1247 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 ETS2P15036 469 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 HOXB9P17482 250 aaPredicted RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 HK1P19367 917 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 ME2P23368 584 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 CA7P43166 264 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 SLC6A8P48029 635 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 P2RX1P51575 399 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 MNAT1P51948 309 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 MVDP53602 400 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 EEFSECP57772 596 aaKnown RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 CDK6Q00534 326 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 FUT5Q11128 374 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 CBFBQ13951 182 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 FGFBP1Q14512 234 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 EIF2S3LQ2VIR3 472 aaKnown RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 LIN52Q52LA3 116 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 EIPR1Q53HC9 387 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 RUNDC3AQ59EK9 446 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 PDZK1Q5T2W1 519 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 INTS11Q5TA45 600 aaKnown RBP8.31□□□□□ -1.08
NUP54-207ENST00000508583 RAET1LQ5VY80 246 aa8.31□□□□□ -1.08
NUP54-207ENST00000508583 TMEM211Q6ICI0 200 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms