RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 STAM2O75886 525 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 SLC2A10O95528 541 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 SNAI1O95863 264 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 PROS1P07225 676 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 CPN1P15169 458 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 PTPN4P29074 926 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 WNT4P56705 351 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 RPS4XP62701 263 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF85Q03923 595 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 SIGLEC14Q08ET2 396 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 SCARB2Q14108 478 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 CD226Q15762 336 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 RTL6Q6ICC9 239 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 CXCL17Q6UXB2 119 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 LUZP1Q86V48 1076 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 MRPL38Q96DV4 380 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 DDX50Q9BQ39 737 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 UPF3BQ9BZI7 483 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 GANQ9H2C0 597 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 DCTPP1Q9H773 170 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 CENPMQ9NSP4 180 aa3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 RPH3AQ9Y2J0 694 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 MTF2Q9Y483 593 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-206ENST00000508524 FAM231BA6NCW3 169 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 B4DXG7 233 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 CYB561D2O14569 222 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 SH2D1BO14796 132 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF853P0CG23 659 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 SAA4P35542 130 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 BTDP43251 543 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 OR1D4P47884 311 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 P2RY4P51582 365 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF133P52736 654 aaPredicted RBP3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 EFNA3P52797 238 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 SNU13P55769 128 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 CCNA1P78396 465 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 KRT31Q15323 416 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 TRADDQ15628 312 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 LINC00696Q6ZRV3 163 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 STHQ8IWL8 128 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 TFB1MQ8WVM0 346 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 C12orf42Q96LP6 360 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 GLT1D1Q96MS3 346 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 TGS1Q96RS0 853 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 FUNDC2Q9BWH2 189 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 HES7Q9BYE0 225 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF702PQ9H963 129 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 MAGEF1Q9HAY2 307 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 NRN1Q9NPD7 142 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 ESM1Q9NQ30 184 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 CNIH4Q9P003 139 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 APOBEC3BQ9UH17 382 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 CCPG1Q9ULG6 757 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 NTNG1Q9Y2I2 539 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 MYH2Q9UKX2 1941 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 MROH7Q68CQ1 1323 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 RELNP78509 3460 aa3.42□□□□□ -1.86
TOPBP1-206ENST00000508524 CDK5RAP2Q96SN8 1893 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 TANC1Q9C0D5 1861 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 MYH13Q9UKX3 1938 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 FLNCQ14315 2725 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 DOPEY1Q5JWR5 2465 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 IGLV8-61A0A075B6I0 122 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 C19orf81C9J6K1 198 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 G3V3Y1 287 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 SLC17A2O00624 439 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 REC8O95072 547 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 ACTL6AO96019 429 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 HSPB1P04792 205 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 HSP90AA1P07900 732 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 ALPIP09923 528 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 STIP1P31948 543 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 GEMP55040 296 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 SERTAD2Q14140 314 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 GK2Q14410 553 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 HKDC1Q2TB90 917 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 TCHHL1Q5QJ38 904 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 ZNF658Q5TYW1 1059 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 PRAMEF8Q5VWM4 474 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 SYCP3Q8IZU3 236 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 GOT1L1Q8NHS2 421 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 CCDC26Q8TAB7 109 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 PHOSPHO2Q8TCD6 241 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 SETD7Q8WTS6 366 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 CPXM1Q96SM3 734 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 C19orf24Q9BVV8 132 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 RPAP3Q9H6T3 665 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 MCM3APO60318 1980 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 MROH5Q6ZUA9 1318 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 KIF16BQ96L93 1317 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 MAPK8IP3Q9UPT6 1336 aa3.41□□□□□ -1.86
TOPBP1-206ENST00000508524 TYROBPO43914 113 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNF861PO60384 105 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 PDE5AO76074 875 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ASNSP08243 561 aa3.4□□□□□ -1.87
TOPBP1-206ENST00000508524 ZNF32P17041 273 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms