RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TGM7Q96PF1 710 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 OR5M11Q96RB7 305 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 MBOAT4Q96T53 435 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC25A31Q9H0C2 315 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 PGAP2Q9UHJ9 254 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 UBE2J1Q9Y385 318 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ETV7Q9Y603 341 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 A0A1W2PQ45 241 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 A0A1W2PQY0 241 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 C2orf78A6NCI8 922 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TRABD2BA6NFA1 517 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ADM5C9JUS6 153 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC16A8O95907 504 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 HMGCLP35914 325 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC1A3P43003 542 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 GALK2Q01415 458 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TNFRSF17Q02223 184 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 PLA2G7Q13093 441 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TP53I3Q53FA7 332 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 C18orf63Q68DL7 685 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 RTL6Q6ICC9 239 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 NXPE4Q6UWF7 544 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF534Q76KX8 674 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 DNAAF1Q8NEP3 725 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 OR6M1Q8NGM8 313 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 DUSP19Q8WTR2 217 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 HAS2Q92819 552 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLCO4A1Q96BD0 722 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 PDLIM5Q96HC4 596 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM175Q9BSA9 504 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SDHAF3Q9NRP4 125 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 IL36AQ9UHA7 158 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SCML1Q9UN30 329 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 MRPS23Q9Y3D9 190 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TMEM200CA6NKL6 621 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ZNF850A8MQ14 1090 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 H7C1Q1 480 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TNFRSF10BO14763 440 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 MTX2O75431 263 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 C8orf89P0DMQ9 161 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 PRPS1P60891 318 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 PIN1Q13526 163 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 NKPD1Q17RQ9 610 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 DEFB128Q7Z7B8 93 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ADGRG3Q86Y34 549 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SKA3Q8IX90 412 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 TRAM1L1Q8N609 369 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 LFNGQ8NES3 379 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLC30A7Q8NEW0 376 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 OR51D1Q8NGF3 324 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 OR52N1Q8NH53 320 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 NANPQ8TBE9 248 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 C14orf79Q96F83 325 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLCO5A1Q9H2Y9 848 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 ISYNA1Q9NPH2 558 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 SLAMF8Q9P0V8 285 aa6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 NDRG4Q9ULP0 352 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-224ENST00000508474 A0A087WZY1 265 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 ATG12O94817 140 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 NFATC1O95644 943 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 TBX18O95935 607 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 CR2P20023 1033 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 TM4SF1P30408 202 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 CXADRP78310 365 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 LTBQ06643 244 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF789Q5FWF6 425 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 TBPL2Q6SJ96 375 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 UQCC3Q6UW78 93 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF704Q6ZNC4 412 aaPredicted RBP6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 FUNDC1Q8IVP5 155 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 NANOGP1Q8N7R0 232 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 OR2A12Q8NGT7 310 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 OVCA2Q8WZ82 227 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 FRZBQ92765 325 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 RAB3CQ96E17 227 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 KLHL15Q96M94 604 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC38A3Q99624 504 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 GMPR2Q9P2T1 348 aaKnown RBP6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 CYB5R1Q9UHQ9 305 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 MYH1P12882 1939 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 MYH4Q9Y623 1939 aa6.9□□□□□ -1.31
UBE2D3-224ENST00000508474 A0A1B0GV50 99 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 MANSC4A6NHS7 340 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 H3BSH0 61 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SIX6O95475 246 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CD1EP15812 388 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 STK19P49842 368 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RAB1AP62820 205 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 RPS26P62854 115 aaKnown RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CSNK2A1P68400 391 aaPredicted RBP6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 CDK3Q00526 305 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 AQP6Q13520 282 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 MFSD13AQ14CX5 517 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 SOHLH1Q5JUK2 328 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 C17orf107Q6ZR85 190 aa6.89□□□□□ -1.31
UBE2D3-224ENST00000508474 COMMD6Q7Z4G1 85 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms