RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PARLQ9H300 379 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 YY1AP1Q9H869 796 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 SGK2Q9HBY8 427 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 STARD5Q9NSY2 213 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 DEPPQ9NTK1 212 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 MRPL39Q9NYK5 338 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 FBXO7Q9Y3I1 522 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 ALG6Q9Y672 507 aa3.3□□□□□ -1.88
TRAPPC13-209ENST00000508304 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ARHGEF35A5YM69 484 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 FBLL1A6NHQ2 334 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF724A8MTY0 619 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 GOLGA8SH3BPF8 625 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 POLR2DO15514 142 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 HOXD4P09016 255 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ALOX5P09917 674 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 MX1P20591 662 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 NT5EP21589 574 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ATP5A1P25705 553 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 GRIA1P42261 906 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC1A4P43007 532 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 NOVA1P51513 510 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 RPL23AP62750 156 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 CD300CQ08708 224 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 GANABQ14697 944 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ATXN7L3Q14CW9 347 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 WDR43Q15061 677 aaKnown RBP eCLIP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 UPP1Q16831 310 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 CYBRD1Q53TN4 286 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR8G2PQ6IF36 304 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 PYHIN1Q6K0P9 492 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ERICH1Q86X53 443 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 TGIF2LXQ8IUE1 241 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 MTURNQ8N3F0 131 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 C7orf34Q96L11 122 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 TGM7Q96PF1 710 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC30A2Q9BRI3 323 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 TSSK1BQ9BXA7 367 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 POLR3FQ9H1D9 316 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 LIME1Q9H400 295 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 GPN2Q9H9Y4 310 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 GNB4Q9HAV0 340 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ADGRL4Q9HBW9 690 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 IL1RAPQ9NPH3 570 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 THYN1Q9P016 225 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 SUN2Q9UH99 717 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 CELA1Q9UNI1 258 aa3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 EXOSC1Q9Y3B2 195 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-209ENST00000508304 ATP10DQ9P241 1426 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TRGV8A0A0C4DH27 118 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TRABD2BA6NFA1 517 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 LRRIQ4A6NIV6 560 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC2A3P11169 496 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 SFTPCP11686 197 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 CPN1P15169 458 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 SPRP35270 261 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 PEX19P40855 299 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 FNTAP49354 379 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 STK19P49842 368 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 AP3M2P53677 418 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 PLOD1Q02809 727 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 PLD1Q13393 1074 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 ITPK1Q13572 414 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 PRAMEF5Q5TYX0 476 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 PRAMEF6Q5VXH4 476 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TPGS2Q68CL5 300 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TMEM184AQ6ZMB5 413 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 CCDC73Q6ZRK6 1079 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 APTXQ7Z2E3 356 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 HSD11B1LQ7Z5J1 315 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 CEACAM19Q7Z692 300 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 ANKRD37Q7Z713 158 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM228AQ86W67 206 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 CATSPER3Q86XQ3 398 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 CLDN19Q8N6F1 224 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 Q8N7P7 452 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR5D13Q8NGL4 314 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR1B1Q8NGR6 318 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TBCKQ8TEA7 893 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 RASD2Q96D21 266 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 RAB3CQ96E17 227 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 DNAJA3Q96EY1 480 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 AMDHD1Q96NU7 426 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM173AQ9BQD7 235 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TTYH2Q9BSA4 534 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 FEM1AQ9BSK4 669 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TRIM9Q9C026 710 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 MAGT1Q9H0U3 335 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 NCOR1P1Q9H4R4 102 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 METTL7AQ9H8H3 244 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 MOB1AQ9H8S9 216 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 RAB18Q9NP72 206 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 POLE4Q9NR33 117 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 RAB20Q9NX57 234 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 PIPOXQ9P0Z9 390 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 MBD2Q9UBB5 411 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 RNF115Q9Y4L5 304 aa3.28□□□□□ -1.88
TRAPPC13-209ENST00000508304 TRBV7-9A0A0J9YWB2 115 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms