RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 NDE1Q9NXR1 346 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 QPCTLQ9NXS2 382 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 PPP4R1LQ9P1A2 415 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 USP22Q9UPT9 525 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 C15orf41Q9Y2V0 281 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 L3MBTL1Q9Y468 752 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
TCOF1-210ENST00000506767 BOD1L1Q8NFC6 3051 aa11.71□□□□□ -0.53
TCOF1-210ENST00000506767 H3BNH8 94 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PYCARD-AS1I3L0S3 204 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ACOT7O00154 380 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 WISP2O76076 250 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PLA2G2AP14555 144 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF24P17028 368 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ENDOUP21128 410 aaKnown RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 MST1P26927 711 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 MSX1P28360 303 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PCGF2P35227 344 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PGM1P36871 562 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 MASP1P48740 699 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 MLLT10P55197 1068 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PPIAP62937 165 aaKnown RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 KCNJ10P78508 379 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ALDH6A1Q02252 535 aaKnown RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PLGLB1Q02325 96 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PLAURQ03405 335 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 LIPEQ05469 1076 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 BNIP1Q12981 228 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 VEZF1Q14119 521 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 OR5M10Q6IEU7 315 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 C16orf89Q6UX73 402 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 RINLQ6ZS11 566 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 CCDC80Q76M96 950 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 SLC22A16Q86VW1 577 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PEX5LQ8IYB4 626 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 GATSQ8NAP1 163 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 FAM71CQ8NEG0 241 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 OR2T12Q8NG77 320 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 OR2M3Q8NG83 312 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 PHOSPHO1Q8TCT1 267 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 NR4A3Q92570 626 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 JSRP1Q96MG2 331 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 SLX1AQ9BQ83 275 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ALG2Q9H553 416 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 TAS2R1Q9NYW7 299 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 GMPR2Q9P2T1 348 aaKnown RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 FBXL2Q9UKC9 423 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ANGPT4Q9Y264 503 aa11.7□□□□□ -0.54
TCOF1-210ENST00000506767 MRPS18CQ9Y3D5 142 aaKnown RBP11.7□□□□□ -0.54
TCOF1-210ENST00000506767 ELOVL7A1L3X0 281 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CLDN24A6NM45 220 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 FAM166BA8MTA8 275 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 OIP5O43482 229 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 EIF4E2O60573 245 aaKnown RBP11.69□□□□□ -0.54
TCOF1-210ENST00000506767 DNAJA2O60884 412 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 HPNP05981 417 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 THBS1P07996 1170 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 PABPC4LP0CB38 370 aaKnown RBP11.69□□□□□ -0.54
TCOF1-210ENST00000506767 NID1P14543 1247 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 IL7RP16871 459 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 MAGEA5P43359 124 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 GSK3BP49841 420 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 TDGF1P3P51864 188 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 MXRA7P84157 204 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF117Q03924 483 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CMPK2Q5EBM0 449 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 RNF220Q5VTB9 566 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CBLN3Q6UW01 205 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 EIF3MQ7L2H7 374 aaKnown RBP11.69□□□□□ -0.54
TCOF1-210ENST00000506767 HMGN2P46Q86SG4 172 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 VRK2Q86Y07 508 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CMIPQ8IY22 773 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 MICU2Q8IYU8 434 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 DEFB107AQ8IZN7 70 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 ZNF614Q8N883 585 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 OR52P1PQ8NH57 321 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CPT1CQ8TCG5 803 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 WDR60Q8WVS4 1066 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 SLC7A6OSQ96CW6 309 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CDRT15Q96T59 188 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 LAT2Q9GZY6 243 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 DSN1Q9H410 356 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 ACKR4Q9NPB9 350 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 AGPAT4Q9NRZ5 378 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 OLAHQ9NV23 265 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 MED11Q9P086 117 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 B4GALT7Q9UBV7 327 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CD300AQ9UGN4 299 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 ICAM5Q9UMF0 924 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 SLC35A3Q9Y2D2 325 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 IFT52Q9Y366 437 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 CHST2Q9Y4C5 530 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 PCNX3Q9H6A9 2034 aa11.69□□□□□ -0.54
TCOF1-210ENST00000506767 TLN1Q9Y490 2541 aaKnown RBP11.68□□□□□ -0.54
TCOF1-210ENST00000506767 CDHR4A6H8M9 788 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 PRORSD1PA6NEY8 169 aa11.68□□□□□ -0.54
TCOF1-210ENST00000506767 TFECO14948 347 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms