RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 RAB3DO95716 219 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TSPAN13O95857 204 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LALBAP00709 142 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 IL6RP08887 468 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 OR52Z1P0C646 297 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 WARSP23381 471 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 NDUFS1P28331 727 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 RPA3P35244 121 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MAP3K8P41279 467 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CAMLGP49069 296 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MVKQ03426 396 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MERTKQ12866 999 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 KRR1Q13601 381 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 UBXN2BQ14CS0 331 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 ST3GAL2Q16842 350 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 NKPD1Q17RQ9 610 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LGALSLQ3ZCW2 172 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 HSD17B12Q53GQ0 312 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 RSBN1Q5VWQ0 802 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 WDR88Q6ZMY6 472 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TMPRSS12Q86WS5 348 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TGIF2LXQ8IUE1 241 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 RNASEH2CQ8TDP1 164 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 PSMG2Q969U7 264 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 DACT3Q96B18 629 aaPredicted RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CREB3L1Q96BA8 519 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 HIST1H2AHQ96KK5 128 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 MRGPRX1Q96LB2 322 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 FOXN4Q96NZ1 517 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 GPR78Q96P69 363 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 HIST1H2AJQ99878 128 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 FEM1AQ9BSK4 669 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 CXorf36Q9H7Y0 433 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 WFDC1Q9HC57 220 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 POLE4Q9NR33 117 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 VNN3Q9NY84 501 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 TBX20Q9UMR3 447 aa2.11□□□□□ -2.07
NEDD4-205ENST00000506154 LAMA2P24043 3122 aaKnown RBP2.11□□□□□ -2.07
NEDD4-205ENST00000506154 OR2M5A3KFT3 312 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PCP4L1A6NKN8 68 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PRMT5O14744 637 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 GSTA4O15217 222 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PAPSS1O43252 624 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SC5DO75845 299 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 OR4F21O95013 312 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 HPRP00739 348 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 IGF2P01344 180 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MMP3P08254 477 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 ST6GAL1P15907 406 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 GABRR1P24046 479 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CAPGP40121 348 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MAGEA1P43355 309 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PDLIM4P50479 330 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 DNAJB13P59910 316 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 BTG1P62324 171 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SLC25A3Q00325 362 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 GPR17Q13304 367 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CRHR2Q13324 411 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 HAGHQ16775 308 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 RBM48Q5RL73 367 aaKnown RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MEDAGQ5VYS4 303 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 OR4F3Q6IEY1 312 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 ACSM5Q6NUN0 579 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 DET1Q7L5Y6 550 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MYPOPQ86VE0 399 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CCDC105Q8IYK2 499 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CDK20Q8IZL9 346 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 C12orf76Q8N812 135 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 OR13C8Q8NGS7 320 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PIGKQ92643 395 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 TCEAL3Q969E4 200 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SPSB4Q96A44 273 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 FAM120BQ96EK7 910 aaKnown RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 RNFT2Q96EX2 444 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 TEFMQ96QE5 360 aaKnown RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 KCTD14Q9BQ13 255 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SPATA25Q9BR10 227 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 NAT9Q9BTE0 207 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 WDR11Q9BZH6 1224 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CDIP1Q9H305 208 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 ABHD16BQ9H3Z7 469 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CWH43Q9H720 699 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SAP30LQ9HAJ7 183 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 C3orf14Q9HBI5 128 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 APOBEC3GQ9HC16 384 aaKnown RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 CUTCQ9NTM9 273 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 ZFP57Q9NU63 452 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SDHAF2Q9NX18 166 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 PLCL2Q9UPR0 1127 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SLC27A6Q9Y2P4 619 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 NEUROG3Q9Y4Z2 214 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 KIAA1549Q9HCM3 1950 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 KIR2DL5BA0A0G2JN68 375 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 KIR2DL5BA0A0G2JPC4 375 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MANSC4A6NHS7 340 aaPredicted RBP2.1□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF716A6NP11 495 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 SLC28A1O00337 649 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 FGF16O43320 207 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 MAFKO60675 156 aa2.1□□□□□ -2.07
NEDD4-205ENST00000506154 DUSP11O75319 330 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms